efaa2288304bd000222111bb024c336d8c56929a
hiram
  Tue Sep 22 03:35:40 2026 -0700
chainNet trackDb for danRer11 GCF_052040795.1, otto liftOver

diff --git src/hg/makeDb/trackDb/zebrafish/danRer11/trackDb.ra src/hg/makeDb/trackDb/zebrafish/danRer11/trackDb.ra
index 53b91906f71..87894d50e21 100644
--- src/hg/makeDb/trackDb/zebrafish/danRer11/trackDb.ra
+++ src/hg/makeDb/trackDb/zebrafish/danRer11/trackDb.ra
@@ -1,51 +1,52 @@
 include trackDb.chainNet.ra
 
 # Local declaration so that local gold.html is picked up.
 track gold override
 html gold
 
 # Local declaration so that local gap.html is picked up.
 track gap override
 html gap
 
 track xenoRefGene override
 visibility pack
 
 track mrna override
 visibility dense
 
 searchTable gold
 shortCircuit 1
 termRegex [ABCFLN][A-Z]+[0-9_][0-9]+(\.[0-9]+)?
 query select chrom,chromStart,chromEnd,frag from %s where frag like '%s%%'
 searchPriority 8
 
 track bacEndPairsLift
 shortLabel BAC End Pairs
 longLabel BAC End Pairs
 group map
 priority 15
 visibility hide
 type bigBed 12
 bigDataUrl /gbdb/danRer11/bacEndPairs/bacEndPairs.bb
 
 include choriCloneEnds.ra
 
 # change these two to switch to the new refSeqComposite 2018-02
 #include trackDb.refGene.ra public
 include ../../refSeqComposite.ra
 
 # include danRer11.GCA_052040795.1.chainNet.ra alpha
 # include danRer11.ce11.chainNet.ra alpha
 
 track dnaMethylation
 superTrack on
 shortLabel DNA Methylation
 longLabel DNA Methylation
 group regulation
 priority 3
 html dnaMethylation.html
 
 include methbase2.ra alpha
 
 include danioCode.ra alpha
+# include danRer11.GCF_052040795.1.chainNet.ra alpha