13324df7d810e3cd1d64d93e8f83de7f7611e473 hiram Fri Sep 25 18:55:52 2026 -0700 claude found and error in the code and added a test for the bug refs #34360 diff --git src/utils/pafToPsl/tests/input/indelEdges.paf src/utils/pafToPsl/tests/input/indelEdges.paf new file mode 100644 index 00000000000..fd8f00c2f10 --- /dev/null +++ src/utils/pafToPsl/tests/input/indelEdges.paf @@ -0,0 +1,4 @@ +q1 20 2 18 + t1 20 3 17 12 14 60 cg:Z:3I5M2D5M1I2M +q2 20 1 15 + t2 25 2 18 12 14 60 cg:Z:3D5M2I5M1D2M +q3 20 5 15 - t3 30 2 9 6 8 60 cg:Z:2I3M1D3M2I +q4 20 4 11 - t4 30 1 11 6 8 60 cg:Z:2D3M1I3M2D