1bb611971263cd3ea1b73ef3e1b1f5eaa28d0a5d jcasper Sun Jul 27 01:11:19 2025 -0700 Installing updated hg.conf files from UCSC servers diff --git confs/euro.hg.conf confs/euro.hg.conf index ee52987243e..ed0d7891ae9 100644 --- confs/euro.hg.conf +++ confs/euro.hg.conf @@ -124,35 +124,30 @@ sessionDataDir=/userdata/sessions/euro sessionDataDirOld=/userdata # Name prefix of 31 separate databases (one for each day of month, on same # server as customTrash, using customTracks.* profile) for custom track # database tables that belong to users' saved sessions, analogous to # sessionDataDir setting for saved session files. # The databases must be named as this prefix followed by {01, 02, 03, ... 31}. # For example, if the value is "customData" then the databases are named # customData01, customData02, ... customData31. sessionDataDbPrefix=customData # Recommended track sets refs #25601 browser.recTrackSets=on -# Enable hgPhyloPlace: -hgPhyloPlaceEnabled=on -nextstrainHost=https://nextstrain.org -hgPhyloPlaceServerDir=/userdata/hgPhyloPlace/rr - # Enable FreeType fonts freeType=on freeTypeDir=../htdocs/urw-fonts # prefix to genark hubs genarkHubPrefix=/gbdb/genark # Database specific settings wuhCor1_TopLink=http://genome.ucsc.edu/goldenPath/help/covidBrowserIntro.html wuhCor1_TopLinkLabel=Quick start guide # Addition requested by gperez 8/7/21 # Commented out by request dschmelt 9/20/21 #analytics.trackButtons=off @@ -203,21 +198,18 @@ # Increases the number of items that can be queried from a bigBed file bigBedMaxItems=100000 # Enables the pop-up when clicking items option on the configure page canDoHgcInPopUp=true # Enables the grouping feature for track hubs trackHubsCanAddGroups=on # Adding more aggressive bot delay #35729 newBotDelay=on # Increases the number of items that can be queried from a BAM file BAMMaxItems=30000 -# new flag for testing rm32751 turn on automatic creation of custom tracks from hgBlat results. -autoBlatBigPsl=on - # BLAT shows locus name of the match #35993 blatShowLocus=off