75711ca6eda92d718879304fde2251bcdedd8534
jcasper
Sat Apr 12 17:18:29 2025 -0700
V48lift37 knownGene trackDb, refs #35187
diff --git src/hg/makeDb/trackDb/human/hg19/knownGeneArchive.ra src/hg/makeDb/trackDb/human/hg19/knownGeneArchive.ra
index 5abfef1190a..f977d2c5bea 100644
--- src/hg/makeDb/trackDb/human/hg19/knownGeneArchive.ra
+++ src/hg/makeDb/trackDb/human/hg19/knownGeneArchive.ra
@@ -47,15 +47,41 @@
directUrl /cgi-bin/hgGene?hgg_gene=%s&hgg_chrom=%s&hgg_start=%d&hgg_end=%d&hgg_type=%s&db=%s
labelFields geneName,name,geneName2,name2
defaultLabelFields geneName
itemRgb on
externalDb knownGeneV45lift37
maxItems 50000
html knownGeneV45lift37
searchIndex name
idXref kgAlias kgID alias
intronGap 12
defaultLinkedTables kgXref
squishyPackPoint 1
squishyPackField rank
squishyPackLabel Number of transcripts shown at full height (ranked by GENCODE transcript ranking)
+ track knownGeneV47lift37
+ shortLabel GENCODE V47lift37
+ longLabel GENCODE V47lift37
+ parent knownGeneArchive
+ priority 5
+ visibility pack
+ type bigGenePred
+ bigDataUrl /gbdb/hg19/gencode/gencodeV47lift37.bb
+ baseColorDefault genomicCodons
+ group genes
+ isGencode3 on
+ directUrl /cgi-bin/hgGene?hgg_gene=%s&hgg_chrom=%s&hgg_start=%d&hgg_end=%d&hgg_type=%s&db=%s
+ labelFields geneName,name,geneName2,name2
+ defaultLabelFields geneName
+ itemRgb on
+ externalDb knownGeneV47lift37
+ maxItems 50000
+ html knownGeneV47lift37
+ searchIndex name
+ idXref kgAlias kgID alias
+ intronGap 12
+ defaultLinkedTables kgXref
+ squishyPackPoint 1
+ squishyPackField rank
+ squishyPackLabel Number of transcripts shown at full height (ranked by GENCODE transcript ranking)
+