75711ca6eda92d718879304fde2251bcdedd8534 jcasper Sat Apr 12 17:18:29 2025 -0700 V48lift37 knownGene trackDb, refs #35187 diff --git src/hg/makeDb/trackDb/human/hg19/trackDb.ra src/hg/makeDb/trackDb/human/hg19/trackDb.ra index 76d4b377e97..82282810465 100644 --- src/hg/makeDb/trackDb/human/hg19/trackDb.ra +++ src/hg/makeDb/trackDb/human/hg19/trackDb.ra @@ -2044,50 +2044,51 @@ color 0,0,0 altColor 90,90,90 exonArrows off track mapViewGenes shortLabel MapView Genes longLabel RefSeq Genes from Map View group genes visibility hide color 82,82,160 type genePred hgsid on baseColorUseCds given baseColorDefault genomicCodons -track knownGeneOld6 -shortLabel Old UCSC Genes -longLabel Previous Version of UCSC Genes -group genes -visibility hide -color 82,82,160 -type genePred -hgsid on -oldToNew kg6ToKg7 -baseColorUseCds given -baseColorDefault genomicCodons - -searchName knownGeneOld6 -searchTable knownGeneOld6 -searchDescription Previous Version of UCSC Genes -searchMethod fuzzy -query select chrom, txStart,txEnd, name from %s where name like '%%%s%%' -searchPriority 3.53 - -include knownGene.ra +#track knownGeneOld6 +#shortLabel Old UCSC Genes +#longLabel Previous Version of UCSC Genes +#group genes +#visibility hide +#color 82,82,160 +#type genePred +#hgsid on +#oldToNew kg6ToKg7 +#baseColorUseCds given +#baseColorDefault genomicCodons + +#searchName knownGeneOld6 +#searchTable knownGeneOld6 +#searchDescription Previous Version of UCSC Genes +#searchMethod fuzzy +#query select chrom, txStart,txEnd, name from %s where name like '%%%s%%' +#searchPriority 3.53 + +include knownGene.ra beta,public +include knownGene.alpha.ra alpha include lincRNAs.ra track sibTxGraph override priority 11 url http://ccg.vital-it.ch/cgi-bin/tromer/tromergraph2draw.pl?db=hg19&species=H.+sapiens&tromer=$$ searchTable affyCytoScan searchMethod exact searchType bed semiShortCircuit 1 termRegex [S|s|C|c]-[0-9][A-Za-z]+ searchPriority 50 padding 250 track qPcrPrimers override