75711ca6eda92d718879304fde2251bcdedd8534
jcasper
  Sat Apr 12 17:18:29 2025 -0700
V48lift37 knownGene trackDb, refs #35187

diff --git src/hg/makeDb/trackDb/human/hg19/knownGeneArchive.ra src/hg/makeDb/trackDb/human/hg19/knownGeneArchive.ra
index 5abfef1190a..f977d2c5bea 100644
--- src/hg/makeDb/trackDb/human/hg19/knownGeneArchive.ra
+++ src/hg/makeDb/trackDb/human/hg19/knownGeneArchive.ra
@@ -1,61 +1,87 @@
 
 track knownGeneArchive
 superTrack on
 shortLabel Genes Archive
 longLabel Previous versions of GENCODE/UCSC Genes (knownGene)
 group genes
 type bed 6 +
 priority 3
 html ../../knownGeneArchive
 
 
     track knownGeneKent
     #table knownGene
     shortLabel UCSC Genes 2013
     longLabel Legacy UCSC Genes track (knownGene) from 2013
     parent knownGeneArchive
     priority 5
     visibility pack
     type bigGenePred
     bigDataUrl /gbdb/hg19/knownGeneKent.bb
     baseColorDefault genomicCodons
     group genes
     #isGencode3 on
     directUrl /cgi-bin/hgGene?hgg_gene=%s&hgg_chrom=%s&hgg_start=%d&hgg_end=%d&hgg_type=%s&db=%s
     labelFields geneName,name,geneName2,name2
     defaultLabelFields geneName
     itemRgb on
     externalDb knownGeneKentHg19
     maxItems 50000
     html knownGene
     searchIndex name
     idXref kgAlias kgID alias
     intronGap 12
     defaultLinkedTables kgXref
 
     track knownGeneV45lift37
     shortLabel GENCODE V45lift37
     longLabel GENCODE V45lift37
     parent knownGeneArchive
     priority 5
     visibility pack
     type bigGenePred
     bigDataUrl /gbdb/hg19/gencode/gencodeV45lift37.bb
     baseColorDefault genomicCodons
     group genes
     isGencode3 on
     directUrl /cgi-bin/hgGene?hgg_gene=%s&hgg_chrom=%s&hgg_start=%d&hgg_end=%d&hgg_type=%s&db=%s
     labelFields geneName,name,geneName2,name2
     defaultLabelFields geneName
     itemRgb on
     externalDb knownGeneV45lift37
     maxItems 50000
     html knownGeneV45lift37
     searchIndex name
     idXref kgAlias kgID alias
     intronGap 12
     defaultLinkedTables kgXref
     squishyPackPoint 1
     squishyPackField rank
     squishyPackLabel Number of transcripts shown at full height (ranked by <A href="#squishyPack">GENCODE transcript ranking</A>)
 
+    track knownGeneV47lift37
+    shortLabel GENCODE V47lift37
+    longLabel GENCODE V47lift37
+    parent knownGeneArchive
+    priority 5
+    visibility pack
+    type bigGenePred
+    bigDataUrl /gbdb/hg19/gencode/gencodeV47lift37.bb
+    baseColorDefault genomicCodons
+    group genes
+    isGencode3 on
+    directUrl /cgi-bin/hgGene?hgg_gene=%s&hgg_chrom=%s&hgg_start=%d&hgg_end=%d&hgg_type=%s&db=%s
+    labelFields geneName,name,geneName2,name2
+    defaultLabelFields geneName
+    itemRgb on
+    externalDb knownGeneV47lift37
+    maxItems 50000
+    html knownGeneV47lift37
+    searchIndex name
+    idXref kgAlias kgID alias
+    intronGap 12
+    defaultLinkedTables kgXref
+    squishyPackPoint 1
+    squishyPackField rank
+    squishyPackLabel Number of transcripts shown at full height (ranked by <A href="#squishyPack">GENCODE transcript ranking</A>)
+