717ce54a6012dedd51b0100c643a7a252a16fabb
jnavarr5
  Fri Sep 25 17:46:20 2026 -0700
Adding windowingFuction maximum to trackDb and the script that generates the trackDb file. refs #35528

diff --git src/hg/makeDb/trackDb/human/hs1/transcriptionStart.ra src/hg/makeDb/trackDb/human/hs1/transcriptionStart.ra
index 80e676a08c7..21d4770f124 100644
--- src/hg/makeDb/trackDb/human/hs1/transcriptionStart.ra
+++ src/hg/makeDb/trackDb/human/hs1/transcriptionStart.ra
@@ -21,30 +21,31 @@
     defaultSortField Cell_line
     maxCheckboxes 50
     noInherit on
     visibility hide
     priority 2
 
         track proCapNet_A673_pred
         parent proCapNet on
         container multiWig
         aggregate solidOverlay
         showSubtrackColorOnUi on
         type bigWig
         autoScale on
         alwaysZero on
         maxHeightPixels 100:40:8
+        windowingFunction maximum
         color 0,114,178
         shortLabel A673 Predicted
         longLabel A673 ProCapNet predicted PRO-cap, plus strand up and minus strand down
         onlyVisibility full
         priority 1
 
             track proCapNet_A673_pred_pos
             parent proCapNet_A673_pred
             type bigWig
             bigDataUrl /gbdb/hs1/proCapNet/pred/A673.proCapNet.pos.bw
             color 0,114,178
             shortLabel A673 Predicted +
             longLabel A673 ProCapNet predicted PRO-cap, plus strand
 
             track proCapNet_A673_pred_neg
@@ -54,30 +55,31 @@
             color 0,114,178
             altColor 0,114,178
             negateValues on
             shortLabel A673 Predicted -
             longLabel A673 ProCapNet predicted PRO-cap, minus strand
 
         track proCapNet_Caco-2_pred
         parent proCapNet on
         container multiWig
         aggregate solidOverlay
         showSubtrackColorOnUi on
         type bigWig
         autoScale on
         alwaysZero on
         maxHeightPixels 100:40:8
+        windowingFunction maximum
         color 213,94,0
         shortLabel Caco-2 Predicted
         longLabel Caco-2 ProCapNet predicted PRO-cap, plus strand up and minus strand down
         onlyVisibility full
         priority 2
 
             track proCapNet_Caco-2_pred_pos
             parent proCapNet_Caco-2_pred
             type bigWig
             bigDataUrl /gbdb/hs1/proCapNet/pred/Caco-2.proCapNet.pos.bw
             color 213,94,0
             shortLabel Caco-2 Predicted +
             longLabel Caco-2 ProCapNet predicted PRO-cap, plus strand
 
             track proCapNet_Caco-2_pred_neg
@@ -87,30 +89,31 @@
             color 213,94,0
             altColor 213,94,0
             negateValues on
             shortLabel Caco-2 Predicted -
             longLabel Caco-2 ProCapNet predicted PRO-cap, minus strand
 
         track proCapNet_Calu3_pred
         parent proCapNet on
         container multiWig
         aggregate solidOverlay
         showSubtrackColorOnUi on
         type bigWig
         autoScale on
         alwaysZero on
         maxHeightPixels 100:40:8
+        windowingFunction maximum
         color 0,158,115
         shortLabel Calu3 Predicted
         longLabel Calu3 ProCapNet predicted PRO-cap, plus strand up and minus strand down
         onlyVisibility full
         priority 3
 
             track proCapNet_Calu3_pred_pos
             parent proCapNet_Calu3_pred
             type bigWig
             bigDataUrl /gbdb/hs1/proCapNet/pred/Calu3.proCapNet.pos.bw
             color 0,158,115
             shortLabel Calu3 Predicted +
             longLabel Calu3 ProCapNet predicted PRO-cap, plus strand
 
             track proCapNet_Calu3_pred_neg
@@ -120,30 +123,31 @@
             color 0,158,115
             altColor 0,158,115
             negateValues on
             shortLabel Calu3 Predicted -
             longLabel Calu3 ProCapNet predicted PRO-cap, minus strand
 
         track proCapNet_HUVEC_pred
         parent proCapNet on
         container multiWig
         aggregate solidOverlay
         showSubtrackColorOnUi on
         type bigWig
         autoScale on
         alwaysZero on
         maxHeightPixels 100:40:8
+        windowingFunction maximum
         color 204,121,167
         shortLabel HUVEC Predicted
         longLabel HUVEC ProCapNet predicted PRO-cap, plus strand up and minus strand down
         onlyVisibility full
         priority 4
 
             track proCapNet_HUVEC_pred_pos
             parent proCapNet_HUVEC_pred
             type bigWig
             bigDataUrl /gbdb/hs1/proCapNet/pred/HUVEC.proCapNet.pos.bw
             color 204,121,167
             shortLabel HUVEC Predicted +
             longLabel HUVEC ProCapNet predicted PRO-cap, plus strand
 
             track proCapNet_HUVEC_pred_neg
@@ -153,30 +157,31 @@
             color 204,121,167
             altColor 204,121,167
             negateValues on
             shortLabel HUVEC Predicted -
             longLabel HUVEC ProCapNet predicted PRO-cap, minus strand
 
         track proCapNet_K562_pred
         parent proCapNet on
         container multiWig
         aggregate solidOverlay
         showSubtrackColorOnUi on
         type bigWig
         autoScale on
         alwaysZero on
         maxHeightPixels 100:40:8
+        windowingFunction maximum
         color 230,159,0
         shortLabel K562 Predicted
         longLabel K562 ProCapNet predicted PRO-cap, plus strand up and minus strand down
         onlyVisibility full
         priority 5
 
             track proCapNet_K562_pred_pos
             parent proCapNet_K562_pred
             type bigWig
             bigDataUrl /gbdb/hs1/proCapNet/pred/K562.proCapNet.pos.bw
             color 230,159,0
             shortLabel K562 Predicted +
             longLabel K562 ProCapNet predicted PRO-cap, plus strand
 
             track proCapNet_K562_pred_neg
@@ -186,30 +191,31 @@
             color 230,159,0
             altColor 230,159,0
             negateValues on
             shortLabel K562 Predicted -
             longLabel K562 ProCapNet predicted PRO-cap, minus strand
 
         track proCapNet_MCF10A_pred
         parent proCapNet on
         container multiWig
         aggregate solidOverlay
         showSubtrackColorOnUi on
         type bigWig
         autoScale on
         alwaysZero on
         maxHeightPixels 100:40:8
+        windowingFunction maximum
         color 86,180,233
         shortLabel MCF10A Predicted
         longLabel MCF10A ProCapNet predicted PRO-cap, plus strand up and minus strand down
         onlyVisibility full
         priority 6
 
             track proCapNet_MCF10A_pred_pos
             parent proCapNet_MCF10A_pred
             type bigWig
             bigDataUrl /gbdb/hs1/proCapNet/pred/MCF10A.proCapNet.pos.bw
             color 86,180,233
             shortLabel MCF10A Predicted +
             longLabel MCF10A ProCapNet predicted PRO-cap, plus strand
 
             track proCapNet_MCF10A_pred_neg