96e0a50a6dc4cba147be2dfed06775ccabf25378
jnavarr5
Fri Apr 24 15:26:48 2026 -0700
Fixing the bigDataUrl since the track disappeared on the RR, refs #36258
diff --git src/hg/makeDb/trackDb/human/longReadVariants.ra src/hg/makeDb/trackDb/human/longReadVariants.ra
index 390e342bdae..8a83ff272d5 100644
--- src/hg/makeDb/trackDb/human/longReadVariants.ra
+++ src/hg/makeDb/trackDb/human/longReadVariants.ra
@@ -1,38 +1,38 @@
track longReadVariants
superTrack on
shortLabel Long-read Variants
longLabel Long-read Variants
group varRep
visibility hide
track deepvariant
parent longReadVariants
shortLabel CoLoRSdb small variants
longLabel CoLoRSdb long-read small variants
type vcfTabix
visibility pack
- bigDataUrl /gbdb/$D/colorsDb/CoLoRSdb.GRCh38.v1.2.0.deepvariant.glnexus.vcf.gz
+ bigDataUrl /gbdb/$D/colorsDb/colorsDb.v1.2.0.deepvariant.glnexus.vcf.gz
html colorsDb.html
track pbsv
parent longReadVariants
shortLabel CoLoRSdb structural variants
longLabel CoLoRSdb long-read structural variants
type bigBed 9 +
visibility pack
itemRgb on
bigDataUrl /gbdb/$D/colorsDb/colorsDb.v1.2.0.sv.bb
mouseOver Position: $chrom:${chromStart}-${chromEnd}
SV type: ${svType}
Length: ${svLen} bp
Allele Frequency: ${af}
Alt allele count: ${AC} (Hom: ${AC_Hom}, Het: ${AC_Het}, Hemi: ${AC_Hemi})
Number of samples: ${NS}
Total allele number: ${AN}
HWE p-value: ${HWE}
ExcHet: ${ExcHet}
html colorsDb.html
searchIndex name,svType
filter.svLen 0
filterByRange.svLen on
filterLimits.svLen 0:12000
filterLabel.svLen SV length (bp)
filterValues.svType INS,DEL,INV
filterType.svType multiple
filterLabel.svType Type
filter.AC 0
filterByRange.AC on
filterLimits.AC 0:3000
filterLabel.AC Alt allele count (AC)