Commits for jnavarr5
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v482_base to v483_preview (2025-05-19 to 2025-05-26) v483
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bc0c95fdd2e663fdb969eed6b781f6dff967d553 Mon May 19 14:34:19 2025 -0700
- Announcing the GENOCODE Genes track for human and mouse, refs #35186 #35187 #35189
- src/hg/htdocs/goldenPath/newsarch.html - lines changed 61, context: html, text, full: html, text
14c7bc5418758f5046028bb98cf589d646a9c2c5 Mon May 19 15:04:49 2025 -0700
- Adding the GENCODE Genes announcement to the indexNews page. Fixing a typo for a previous announcement, refs #35186 #35187 #35189
- src/hg/htdocs/indexNews.html - lines changed 13, context: html, text, full: html, text
86e7ae6ee58250f38e017cd73cffe8253d3a92bf Mon May 19 15:05:30 2025 -0700
- Adding pennantIcons for the knownGene release, refs #35186 #35187 #35189
- src/hg/makeDb/trackDb/human/hg19/knownGene.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg38/knownGene.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm39/knownGene.ra - lines changed 1, context: html, text, full: html, text
8e903dc32b2ee82114c67f6f43c89311b3f6db2d Tue May 20 15:10:04 2025 -0700
- Adding the HTML 'varsInPubs.html' to the subtracks in the supertrack that were missing. Adding the number of publications and variant effect to the Varaico mouseover. Bolding items in the mouseover, refs #34595
- src/hg/makeDb/trackDb/human/trackDb.ra - lines changed 6, context: html, text, full: html, text
42d1e9539243d571eeb740e71eda7e31ce5f599a Wed May 21 14:30:21 2025 -0700
- Staging the Varaico track on hgwbeta, refs # 34595
- src/hg/makeDb/trackDb/human/trackDb.ra - lines changed 1, context: html, text, full: html, text
356669aaa62e51676e91f81dc268fcd1af1c2dda Wed May 21 15:21:28 2025 -0700
- Releasing the Varaico tracks for hg38 and hg19, refs #34595
- src/hg/makeDb/trackDb/human/trackDb.ra - lines changed 1, context: html, text, full: html, text
6ce6df9c40490432e381855a700c0cc63eb88b48 Wed May 21 16:16:12 2025 -0700
- Adding an image for the Varaico track announcement, refs #34595
- src/hg/htdocs/images/newsArchImages/Varaico.png - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
b48890099442a18e42a8fcb24c0ab66f9278762a Wed May 21 16:32:09 2025 -0700
- Announcing the Varaico track for hg38 and hg19, refs #34595
- src/hg/htdocs/goldenPath/newsarch.html - lines changed 31, context: html, text, full: html, text
- src/hg/htdocs/indexNews.html - lines changed 12, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/trackDb.ra - lines changed 2, context: html, text, full: html, text
2fe5f8a63e1b5ee3d4bda7a555443ba962f7a33c Wed May 21 16:42:33 2025 -0700
- Fixing a typo in the announcement, refs #34595
- src/hg/htdocs/goldenPath/newsarch.html - lines changed 1, context: html, text, full: html, text
028f8f08e2ce12dfee11e4e49464fbfb17929318 Wed May 21 16:45:04 2025 -0700
- Adding a link to the Varaico website, refs #34595
- src/hg/htdocs/goldenPath/newsarch.html - lines changed 2, context: html, text, full: html, text
e511fcb8774bb67ecbcd97cd6986e7b721d52a4d Wed May 21 16:51:43 2025 -0700
- Making minor changes to the Varaico announcement, refs #34595
- src/hg/htdocs/goldenPath/newsarch.html - lines changed 6, context: html, text, full: html, text
dc0850229a44224143a4e677b10c1563c3b543e5 Wed May 21 16:53:23 2025 -0700
- Changing mouse-over since it is the action, refs #34595
- src/hg/htdocs/goldenPath/newsarch.html - lines changed 1, context: html, text, full: html, text
07baf83163390663f5df285ebf4c620ce527fba0 Thu May 22 09:27:56 2025 -0700
- Adding a note about the coloring in the Varaico track, refs #34595
- src/hg/makeDb/trackDb/human/varsInPubs.html - lines changed 3, context: html, text, full: html, text
e68cc6315fa92edde16a3e27015a15cb94290440 Thu May 22 14:34:00 2025 -0700
- Adding files that were staged as the otto user, no Redmine.
- src/hg/makeDb/trackDb/human/clinvar.alpha.ra - lines changed 7, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/clinvar.ra - lines changed 1, context: html, text, full: html, text
- src/hg/utils/otto/clinvar/clinVarToBed - lines changed 3, context: html, text, full: html, text
- src/hg/utils/otto/clinvar/clinvarDecoration.as - lines changed 22, context: html, text, full: html, text
a2469956ad4608f62f39a0564eaba781a71f2f79 Thu May 22 14:59:35 2025 -0700
- Changing the description of the colors for the Varaico track, refs #34595
- src/hg/makeDb/trackDb/human/varsInPubs.html - lines changed 1, context: html, text, full: html, text
7c6d98294ac965c787499157e31178d353caed96 Fri May 23 14:48:41 2025 -0700
- Commenting out the PubTator track since it isn't released yet, refs #34595
- src/hg/makeDb/trackDb/human/varaico.html - lines changed 97, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/varsInPubs.html - lines changed 2, context: html, text, full: html, text
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