198c9b8daecc44fbda6a6494c566c723920f030a
lrnassar
  Wed Mar 11 18:25:21 2026 -0700
Fixing a few hundred clear typos with the help of Claude. Some are less important in code comments, but majority of them are in user-facing places. I manually approved 60%+ of the changes and didn't see any that were an incorrect suggestion, at worst it was potentially uncessesary, like a code comment having cant instead of can't. No RM.

diff --git src/hg/makeDb/trackDb/human/encodeUncFaire.html src/hg/makeDb/trackDb/human/encodeUncFaire.html
index 482520aa6b6..0bd53c81f38 100644
--- src/hg/makeDb/trackDb/human/encodeUncFaire.html
+++ src/hg/makeDb/trackDb/human/encodeUncFaire.html
@@ -38,31 +38,31 @@
 one subtrack, uncheck the box next to the track you wish to hide. 
 For more information about the graphical configuration options, click the 
 <A HREF="../goldenPath/help/hgWiggleTrackHelp.html" TARGET=_blank>Graph
 configuration help</A> link. Note that the graphical configuration options are 
 available only for the Signal subtrack; the Peaks subtracks are fixed. </P>
 
 <H2>Methods</H2>
 <P>
 To perform FAIRE, proteins were cross-linked to DNA using 
 1% formaldehyde solution, the complex was sheared using sonication, and a 
 phenol/chloroform extraction was performed to remove DNA fragments 
 crosslinked to protein.  The DNA recovered in the aqueous phase was 
 fluorescently-labeled and hybridized to a microarray along with 
 fluorescently-labeled genomic DNA as a control.  Ratios were scaled by 
 subtracting the Tukey Bi-weight mean for the log-ratio values from each 
-log-ratio value, as recomended by NimbleGen.  Results in yeast were 
+log-ratio value, as recommended by NimbleGen.  Results in yeast were 
 consistent with enrichment for nucleosome-depleted regions of the genome. 
 Therefore, the method may have utility as a positive selection for genomic 
 regions with properties normally detected by assays like DNAse 
 hypersensitivity. </P>
 
 <H2>Verification</H2>
 <P>
 The data were verified using PCR with primers designed to promoters enriched 
 with FAIRE and downstream coding regions. </P> 
 
 <H2>Credits</H2>
 <P>
 Cell culture, fixing, and DNA amplification were performed by Jonghwan Kim in 
 the <A HREF="http://microarray.icmb.utexas.edu/" TARGET=_blank>Vishy Iyer 
 lab</A> at the University of Texas, Austin.  FAIRE was done by Paul Giresi in