198c9b8daecc44fbda6a6494c566c723920f030a lrnassar Wed Mar 11 18:25:21 2026 -0700 Fixing a few hundred clear typos with the help of Claude. Some are less important in code comments, but majority of them are in user-facing places. I manually approved 60%+ of the changes and didn't see any that were an incorrect suggestion, at worst it was potentially uncessesary, like a code comment having cant instead of can't. No RM. diff --git src/hg/makeDb/trackDb/human/encodeYaleMASPlacRNATars.html src/hg/makeDb/trackDb/human/encodeYaleMASPlacRNATars.html index 5604ae5fc46..3545dfdd1d0 100644 --- src/hg/makeDb/trackDb/human/encodeYaleMASPlacRNATars.html +++ src/hg/makeDb/trackDb/human/encodeYaleMASPlacRNATars.html @@ -35,31 +35,31 @@ Three independent biological replicates were generated, and each was hybridized to at least two different arrays (technical replicates). Transcribed regions (TARs/transfrags) were then identified using a score threshold of 95th percentile as well as a maximum gap of 80 bp and a minimum run of 50 bp (between oligonucleotide positions), effectively allowing a gap of one oligo and demanding the TAR/transfrag to encompass at least 3 oligos.</P> <H2>Verification</H2> <P> Transcribed regions (TARs/transfrags), as determined by individual biological samples, were compared to ensure significant overlap.</P> <H2>Credits</H2> <P> -These data were generated and analyzed by the the labs of Michael Snyder, +These data were generated and analyzed by the labs of Michael Snyder, Mark Gerstein and Sherman Weissman at Yale University.</P> <H2>References</H2> <P> Kapranov P, Cawley SE, Drenkow J, Bekiranov S, Strausberg RL, Fodor SP, Gingeras TR, <A HREF="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11988577&query_hl=5" TARGET=_blank> Large-scale transcriptional activity in chromosomes 21 and 22</A>, <i>Science</i>. 2002 May 3;296(5569):916-9. <BR><BR> Rinn JL, Euskirchen G, Bertone P, Martone R, Luscombe NM, Hartman S, Harrison PM, Nelson FK, Miller P, Gerstein M, Weissman S, Snyder M,