d10aba5d8ac8abc3655c599b9e421538a8a7e32e lrnassar Wed Jul 22 10:56:04 2026 -0700 Releasing GENCODE V50 knownGene tracks for hg38, hg19 (V50lift37), and mm39 (VM39). Promote knownGene from the alpha-gated staging file to the released trackDb: bump shortLabel/longLabel, bigDataUrl, html, and searchTrix to the new version; collapse the include to a single untagged knownGene.ra; and remove the knownGene.alpha.ra files. refs #37395 #37393 #37391 diff --git src/hg/makeDb/trackDb/human/hg19/trackDb.ra src/hg/makeDb/trackDb/human/hg19/trackDb.ra index 601e12ebc15..46a1c45f51e 100644 --- src/hg/makeDb/trackDb/human/hg19/trackDb.ra +++ src/hg/makeDb/trackDb/human/hg19/trackDb.ra @@ -2083,32 +2083,31 @@ #visibility hide #color 82,82,160 #type genePred #hgsid on #oldToNew kg6ToKg7 #baseColorUseCds given #baseColorDefault genomicCodons #searchName knownGeneOld6 #searchTable knownGeneOld6 #searchDescription Previous Version of UCSC Genes #searchMethod fuzzy #query select chrom, txStart,txEnd, name from %s where name like '%%%s%%' #searchPriority 3.53 -include knownGene.ra beta,public -include knownGene.alpha.ra alpha +include knownGene.ra include lincRNAs.ra track sibTxGraph override priority 11 url http://ccg.vital-it.ch/cgi-bin/tromer/tromergraph2draw.pl?db=hg19&species=H.+sapiens&tromer=$$ searchTable affyCytoScan searchMethod exact searchType bed semiShortCircuit 1 termRegex [S|s|C|c]-[0-9][A-Za-z]+ searchPriority 50 padding 250 track qPcrPrimers override