e6b7a180acff63d77b0d6d4cfba98a2298a7889e lrnassar Wed Jul 22 11:25:18 2026 -0700 Adding GENCODE V50/VM39 release notes to the GENCODE Versions container description page. The per-version subtrack pages were updated for the new release but the wgEncodeGencodeSuper container page Release Notes still topped out at the previous version. Add the new version-to-Ensembl correspondence line (V50/V50lift37/VM39 -> Ensembl 116) for hg38, hg19, and mm39. refs #37396 #37394 #37392 diff --git src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeSuper.html src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeSuper.html index 55857adeeb2..2efe73f9bbb 100644 --- src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeSuper.html +++ src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeSuper.html @@ -51,30 +51,34 @@ <p> GENCODE Genes and its associated tables can be explored interactively using the <a href="../goldenPath/help/api.html" target="_blank">REST API</a>, the <a href="/cgi-bin/hgTables" target="_blank">Table Browser</a> or the <a href="/cgi-bin/hgIntegrator" target="_blank">Data Integrator</a>. The GENCODE data files for hg19 are available in our <a target="_blank" href="http://hgdownload.soe.ucsc.edu/goldenPath/hg19/database/"> downloads directory</a> as wgEncodeGencode* in genePred format. All the tables can also be queried directly from our public MySQL servers, with instructions on this method available on our <a target="_blank" href="/goldenPath/help/mysql.html">MySQL help page</a> and on <a target="_blank" href="http://genome.ucsc.edu/blog/tag/mysql/">our blog</a>.</p> <h2>Release Notes</h2> <p> +<span style="font-weight: bold;">GENCODE version 50lift37 (mapped from GRCh38 to GRCh37)</span> +corresponds to Ensembl 116. +</p> +<p> <span style="font-weight: bold;">GENCODE version 49lift37 (mapped from GRCh38 to GRCh37)</span> corresponds to Ensembl 115. </p> <p> <span style="font-weight: bold;">GENCODE version 48lift37 (mapped from GRCh38 to GRCh37)</span> corresponds to Ensembl 114. </p> <p> <span style="font-weight: bold;">GENCODE version 47lift37 (mapped from GRCh38 to GRCh37)</span> corresponds to Ensembl 113. </p> <p> <span style="font-weight: bold;">GENCODE version 46lift37 (mapped from GRCh38 to GRCh37)</span> corresponds to Ensembl 112. </p>