198c9b8daecc44fbda6a6494c566c723920f030a lrnassar Wed Mar 11 18:25:21 2026 -0700 Fixing a few hundred clear typos with the help of Claude. Some are less important in code comments, but majority of them are in user-facing places. I manually approved 60%+ of the changes and didn't see any that were an incorrect suggestion, at worst it was potentially uncessesary, like a code comment having cant instead of can't. No RM. diff --git src/hg/makeDb/trackDb/human/hg38/description.html src/hg/makeDb/trackDb/human/hg38/description.html index 1619604923d..30be4c79889 100644 --- src/hg/makeDb/trackDb/human/hg38/description.html +++ src/hg/makeDb/trackDb/human/hg38/description.html @@ -132,31 +132,31 @@ <a href="http://hgdownload.soe.ucsc.edu/goldenPath/hg38/bigZips/analysisSet/" target="_blank">downloads page</a>: one without the alternate chromosomes from this assembly, and one that includes them. </ul> <p> <b>Chromosome naming conventions</b> <br> UCSC has introduced some slight changes to the Genome Browser chromosome naming scheme with this release: <ul> <li>Haplotype chromosome, unplaced contig and unlocalized contig names now include their NCBI accession number (e.g., chr6_GL000256v2_alt)</li> <li>The "v2" at the end of the accession number indicates the NCBI version number</li> <li>Haplotype chromosome names consist of the chromosome number, followed by the NCBI accession number, followed by "alt"</li> - <li>Fix sequence names consist of the chromosomes number, followed by the NCBI accession number, + <li>Fix sequence names consist of the chromosome number, followed by the NCBI accession number, followed by "fix" (e.g., chr7_KQ031388v1_fix)</li> <li>Unlocalized contig names consist of the chromosome number, followed by the NCBI accession number, followed by "random"</li> <li>Unplaced contig names (contigs whose associated chromosome is not known) consist of "chrUn" followed by the NCBI accession number</li> </ul> </p> <p> <b>Pseudoautosomal regions</b> <br> The Y chromosome in this assembly contains two pseudoautosomal regions (PARs) that were taken from the corresponding regions in the X chromosome and are exact duplicates: <blockquote> chrY:10,000-2,781,479 and chrY:56,887,902-57,217,415