198c9b8daecc44fbda6a6494c566c723920f030a
lrnassar
  Wed Mar 11 18:25:21 2026 -0700
Fixing a few hundred clear typos with the help of Claude. Some are less important in code comments, but majority of them are in user-facing places. I manually approved 60%+ of the changes and didn't see any that were an incorrect suggestion, at worst it was potentially uncessesary, like a code comment having cant instead of can't. No RM.

diff --git src/hg/makeDb/trackDb/human/hg38/encodeCcreCombined.html src/hg/makeDb/trackDb/human/hg38/encodeCcreCombined.html
index 37f9f6b8038..e73ae1e93c3 100644
--- src/hg/makeDb/trackDb/human/hg38/encodeCcreCombined.html
+++ src/hg/makeDb/trackDb/human/hg38/encodeCcreCombined.html
@@ -58,31 +58,31 @@
         <td>DNase-H3K4me3</td>
         <td>DNase-H3K4me3</td></tr>
 <tr><td style='background-color: #00B0F0;'</td><td>blue</td>
         <td>CTCF</td>
         <td>CTCF-only</td>
         <td>CTCF-only</td></tr>
 </table>
 </p>
 <p>
 The DNase-H3K4me3 elements are those with promoter-like biochemical signature that
 are not within 200bp of an annotated TSS.
 </p>
 
 <h2>Methods</h2>
 <p>
-All individual DNase hypsersensitive sites (DHSs) identified from 706 DNase-seq experiments
+All individual DNase hypersensitive sites (DHSs) identified from 706 DNase-seq experiments
 in humans (a total of 93 million sites from 706 experiments) were iteratively clustered
 and filtered for the highest signal across all experiments, producing 
 representative DHSs (rDHSs), with a total of  2.2 million such sites in human.
 The highest signal elements from this set that were also supported by high H3K4me3, H3K27ac 
 and/or CTCF ChIP-seq signals were designated cCRE's (a total of 926,535 in human).
 </p>
 <p>
 Classification of cCRE's was performed based on the following criteria:
 <ol>
   <li>cCREs with promoter-like signatures (cCRE-PLS) fall within 200 bp of an annotated GENCODE TSS
       and have high DNase and H3K4me3 signals.</li>
   <li>cCREs with enhancer-like signatures (cCRE-ELS) have high DNase and H3K27ac with low H3K4me3
       max-Z score if they are within 200 bp of an annotated TSS. The subset of cCREs-ELS within 2 kb
       of a TSS is denoted proximal (cCRE-pELS), while the remaining subset is denoted distal
       (cCRE-dELS).</li>