0b41a0f1e7f66e0bce33b879275a93ccb9d8f976
lrnassar
  Mon Sep 28 16:33:18 2026 -0700
Fiber-seq description pages: bold the six data type names in the Compendium
Description, and drop three passages that explained our own rendering rather
than the data.  The sample table no longer opens by justifying itself with
how many checkboxes 41 samples times six data types would need; the
difference track now says each position is colored by the most stringent
threshold it meets, instead of describing the order the four signals are
painted in; and the peak paragraph no longer explains that dense mode has no
per-item hover.  "Container name" and "subtracks" become "collection name"
and "FIRE peaks", per the rule against exposing internal container terms, and
the API paragraph points at the Table Browser for the peaks rather than only
saying they are unavailable.  Per Lou's review.  refs #36210

diff --git src/hg/makeDb/trackDb/human/hg38/fiberSeqAcc.html src/hg/makeDb/trackDb/human/hg38/fiberSeqAcc.html
index f47af0c5536..a301c43d1c2 100644
--- src/hg/makeDb/trackDb/human/hg38/fiberSeqAcc.html
+++ src/hg/makeDb/trackDb/human/hg38/fiberSeqAcc.html
@@ -61,31 +61,31 @@
 UCSC without modification. The download and verification steps are documented in the
 <a href="https://github.com/ucscGenomeBrowser/kent/blob/master/src/hg/makeDb/doc/hg38/fiberSeq.txt"
 target="_blank">makeDoc</a>, and the scripts that build the track are in the
 <a href="https://github.com/ucscGenomeBrowser/kent/tree/master/src/hg/makeDb/scripts/fiberSeq"
 target="_blank">kent source tree</a>.
 </p>
 
 <h2>Data Access</h2>
 
 <p>
 The data can be explored interactively in table format with the
 <a href="../cgi-bin/hgTables">Table Browser</a> or the
 <a href="../cgi-bin/hgIntegrator">Data Integrator</a> and exported from there to spreadsheet or
 tab-sep tables. From scripts, the data can be accessed through our
 <a href="https://api.genome.ucsc.edu">API</a>, one cell line at a time, for example
-track=<i>fiberSeqAcc_PM00001</i> for GM12878. The container name <i>fiberSeqAcc</i> holds no
+track=<i>fiberSeqAcc_PM00001</i> for GM12878. The collection name <i>fiberSeqAcc</i> holds no
 data of its own and cannot be queried.
 </p>
 
 <p>
 For automated download and analysis, the signal is stored in bigWig files that can be downloaded
 from <a href="http://hgdownload.soe.ucsc.edu/gbdb/hg38/fiberSeq/" target="_blank">our download
 server</a>. There is one directory per sample accession, and the file for this track is called
 <tt>all.percent.accessible.bw</tt>. Individual regions or the whole genome can be obtained using
 our tool <tt>bigWigToBedGraph</tt>, which can be compiled from the source code or downloaded as a
 precompiled binary for your system. Instructions for downloading source code and binaries can be
 found <a href="http://hgdownload.soe.ucsc.edu/downloads.html#utilities_downloads">here</a>. The
 tool can also be used to obtain values within a given range, e.g.
 <tt>bigWigToBedGraph http://hgdownload.soe.ucsc.edu/gbdb/hg38/fiberSeq/PM00001/all.percent.accessible.bw
 -chrom=chr21 -start=0 -end=100000000 stdout</tt>
 </p>