f2ef97844c0973a30cbbc1afcdd01b4096143a69 lrnassar Wed Jun 3 10:56:07 2026 -0700 Add date-based dataVersion to composite/superTrack otto containers. refs #36455 Composite and superTrack container pages do not display 'Data last updated at UCSC' (printUpdateTime returns early for them), so a dataVersion file is the only freshness signal a user sees there. Add one to the dbVar (dbVarSv), panelApp, clinGen (clinGenComp) and decipher (decipherContainer) containers. Each otto build script writes a per-assembly 'Last updated ' file when it actually updates the data, and the container stanza points to it via dataVersion. clinGen's container date is written by its three displayed feeds (makeDosage, makeGeneValidity, makeClinGenCspec); decipher writes hg38 only (hg19 is frozen). diff --git src/hg/makeDb/trackDb/human/trackDb.clinGen.ra src/hg/makeDb/trackDb/human/trackDb.clinGen.ra index b8d6b61864c..8861c87c236 100644 --- src/hg/makeDb/trackDb/human/trackDb.clinGen.ra +++ src/hg/makeDb/trackDb/human/trackDb.clinGen.ra @@ -1,24 +1,25 @@ track clinGenComp shortLabel ClinGen longLabel ClinGen curation activities (Dosage Sensitivity and Gene-Disease Validity) visibility hide type bigBed 9 + group phenDis itemRgb on compositeTrack on noParentConfig on +dataVersion /gbdb/$D/bbi/clinGen/clinGenVersion.txt html clinGen track clinGenHaplo showCfg on priority 1 parent clinGenComp on shortLabel ClinGen Haploinsufficiency longLabel ClinGen Dosage Sensitivity Map - Haploinsufficiency visibility pack type bigBed 9 + bigDataUrl /gbdb/$D/bbi/clinGen/clinGenHaplo.bb dataVersion /gbdb/$D/bbi/clinGen/clinGenDosageVersion.txt mouseOver Gene/ISCA ID: $name
Haploinsufficiency score: $haploScore
Dosage Sensitivity Evidence: $haploDescription filterValues.haploScore 0|No evidence available,1|Little evidence for dosage pathogenicity,2|Some evidence for dosage pathogenicity,3|Sufficient evidence for dosage pathogenicity,30|Gene associated with autosomal recessive phenotype,40|Dosage sensitivity unlikely filterLabel.haploScore Dosage Sensitivity Score