68c5b3b5dfc4053ff78a6b1d236bd1ac90251cfa
lrnassar
Mon Jun 1 14:40:45 2026 -0700
varFreqs: description pages for the three combined tracks and "SNV" rename
sweep.
Add varFreqsDisease.html and varFreqsArray.html so the two new combined
tracks have full Description/Display/Methods/Data Access/References. Add a
Caveats section on varFreqsArray about chip-data quality vs sequencing.
Update varFreqsAll.html and the supertrack varFreqs.html to reflect the
three-combined-track family (cross-links between siblings, new "Combined
Tracks" section, new table rows, and updated source/variant counts). Add a
GoNL row to the supertrack table.
Sweep 37 subtrack longLabels and four cross-referencing description pages
(colorsDbSnv.html, mei.html, meiSwegen.html, phasedVars.html) from
"Variant Frequencies:" to "SNV Frequencies:" to match the supertrack
shortLabel. refs #36642
diff --git src/hg/makeDb/trackDb/human/varFreqs.ra src/hg/makeDb/trackDb/human/varFreqs.ra
index 03108bfab9b..a2c2053d2e8 100644
--- src/hg/makeDb/trackDb/human/varFreqs.ra
+++ src/hg/makeDb/trackDb/human/varFreqs.ra
@@ -1,26 +1,26 @@
track varFreqs
shortLabel SNV Frequencies
longLabel SNV Frequencies from various cohorts or national projects
group varRep
type bed 12
visibility hide
superTrack on
track varFreqsAll
shortLabel All Databases Combined
- longLabel Variant Frequencies: All Databases Combined with Consequence Annotations
+ longLabel SNV Frequencies: All Databases Combined with Consequence Annotations
type bigBed 9 +
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/_all/varFreqsAll.bb
visibility pack
itemRgb on
maxWindowToDraw 5000000
priority 0.1
mouseOver Var: $name
AA change: $aaChange
Var type: $varType
Conseq: $consequence
Max AF: $maxAF
Total AC: $totalAC
Sources: $sources
# Source database filter
filterValues.sources AllOfUs|AllOfUs,SPARK|SPARK WES,SFARI_WGS|SFARI WGS,GenomeAsia|GenomeAsia SNVs,GenomeAsiaIndel|GenomeAsia Indels,NPM|NPM Singapore,KOVA|KOVA Korea,ToMMo|ToMMo Japan,FinnGen|FinnGen Finland,Saudi|Saudi,SweGen|SweGen Sweden,TOPMed|TOPMed,ABraOM|ABraOM Brazil,ALFA|ALFA,MGRB|MGRB Australia,HRC|HRC,SGDP|SGDP,HGDP1kG|gnomAD HGDP+1kG,GREGoR|GREGoR,SCHEMA|SCHEMA,GA4K|GA4K PacBio LR,CoLoRSdb|CoLoRSdb PacBio LR,SVatalog|SVatalog 101 10XG SR,Tishkoff180|Tishkoff 180 African WGS,WBBC|WBBC China,ChinaMAP|China ChinaMAP,GenomeIndia|GenomeIndia 9.7k WGS,GoNL|GoNL Netherlands ~13x SR
filterType.sources multipleListOr
filterLabel.sources Source Database
# Variant type and consequence filters
filterValues.varType SNV|SNV,INS|Insertion,DEL|Deletion,MNV|MNV
filterLabel.varType Variant Type
@@ -317,31 +317,31 @@
filterByRange.SFARI_WGSAC_NON_AUT on
filterLabel.SFARI_WGSAC_NON_AUT SFARI WGS Non-ASD family AC
# SCHEMA schizophrenia case/control (summed across analysis groups)
filterByRange.SCHEMAAF_CASE on
filterLabel.SCHEMAAF_CASE SCHEMA Schizophrenia case AF
filterByRange.SCHEMAAF_CTRL on
filterLabel.SCHEMAAF_CTRL SCHEMA Control AF
filterByRange.SCHEMAAC_CASE on
filterLabel.SCHEMAAC_CASE SCHEMA Schizophrenia case AC
filterByRange.SCHEMAAC_CTRL on
filterLabel.SCHEMAAC_CTRL SCHEMA Control AC
skipEmptyFields on
track varFreqsDisease
shortLabel Disease-related Databases Combined
- longLabel Variant Frequencies: Disease-related cohorts combined (autism, schizophrenia, rare disease, NHLBI heart/lung/blood)
+ longLabel SNV Frequencies: Disease-related cohorts combined (autism, schizophrenia, rare disease, NHLBI heart/lung/blood)
type bigBed 9 +
parent varFreqs off
bigDataUrl /gbdb/$D/varFreqs/_disease/varFreqsDisease.bb
visibility hide
itemRgb on
maxWindowToDraw 5000000
priority 0.15
mouseOver Var: $name
AA change: $aaChange
Var type: $varType
Conseq: $consequence
Max AF: $maxAF
Total AC: $totalAC
Sources: $sources
filterValues.sources SPARK|SPARK WES,SFARI_WGS|SFARI WGS,TOPMed|TOPMed,SCHEMA|SCHEMA,GREGoR|GREGoR,GA4K|GA4K PacBio LR
filterType.sources multipleListOr
filterLabel.sources Source Database
filterValues.varType SNV|SNV,INS|Insertion,DEL|Deletion,MNV|MNV
filterLabel.varType Variant Type
filterValues.consequence missense|Missense,synonymous|Synonymous,stop_gained|Stop Gained,frameshift|Frameshift,splice_donor|Splice Donor,splice_acceptor|Splice Acceptor,intron|Intron,3_prime_utr|3' UTR,5_prime_utr|5' UTR,non_coding|Non-coding,.|Intergenic,others|Other
filterType.consequence multipleListOr
@@ -415,31 +415,31 @@
filterLabel.GREGoRAF_AFF GREGoR Affected AF
filterByRange.GREGoRAF_UNA on
filterLabel.GREGoRAF_UNA GREGoR Unaffected AF
filterByRange.GREGoRAF_UNK on
filterLabel.GREGoRAF_UNK GREGoR Unknown AF
filterByRange.GREGoRAC_AFF on
filterLabel.GREGoRAC_AFF GREGoR Affected AC
filterByRange.GREGoRAC_UNA on
filterLabel.GREGoRAC_UNA GREGoR Unaffected AC
filterByRange.GREGoRAC_UNK on
filterLabel.GREGoRAC_UNK GREGoR Unknown AC
skipEmptyFields on
track varFreqsArray
shortLabel Genotyping Array Databases Combined
- longLabel Variant Frequencies: Genotyping-array cohorts combined (TPMI, Mexico Biobank, UK Biobank imputed)
+ longLabel SNV Frequencies: Genotyping-array cohorts combined (TPMI, Mexico Biobank, UK Biobank imputed)
type bigBed 9 +
parent varFreqs off
bigDataUrl /gbdb/$D/varFreqs/_array/varFreqsArray.bb
visibility hide
itemRgb on
maxWindowToDraw 5000000
priority 0.2
mouseOver Var: $name
AA change: $aaChange
Var type: $varType
Conseq: $consequence
Max AF: $maxAF
Total AC: $totalAC
Sources: $sources
filterValues.sources TPMI|TPMI Taiwan,MexBB|Mexico Biobank,UKBB|UK Biobank imputed
filterType.sources multipleListOr
filterLabel.sources Source Database
filterValues.varType SNV|SNV,INS|Insertion,DEL|Deletion,MNV|MNV
filterLabel.varType Variant Type
filterValues.consequence missense|Missense,synonymous|Synonymous,stop_gained|Stop Gained,frameshift|Frameshift,splice_donor|Splice Donor,splice_acceptor|Splice Acceptor,intron|Intron,3_prime_utr|3' UTR,5_prime_utr|5' UTR,non_coding|Non-coding,.|Intergenic,others|Other
filterType.consequence multipleListOr
@@ -459,367 +459,367 @@
filterLabel.TPMIAF TPMI Taiwan AF
filterByRange.MexBBAF on
filterLabel.MexBBAF Mexico Biobank AF
filterByRange.UKBBAF on
filterLabel.UKBBAF UK Biobank imputed AF
filterByRange.TPMIAC on
filterLabel.TPMIAC TPMI Taiwan AC
filterByRange.MexBBAC on
filterLabel.MexBBAC Mexico Biobank AC
filterByRange.UKBBAC on
filterLabel.UKBBAC UK Biobank imputed AC
skipEmptyFields on
track allofus
shortLabel AllOfUs v7 245k WGS
- longLabel Variant Frequencies: AllOfUs v7 - 245k WGS, local-ancestry-stratified, AC>=20
+ longLabel SNV Frequencies: AllOfUs v7 - 245k WGS, local-ancestry-stratified, AC>=20
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/_allofus/allOfUs.locAncFreq.vcf.gz
dataVersion V7
visibility hide
tableBrowser off
priority 0.5
#track me
#shortLabel Regeneron Million Exomes 983k WES
- #longLabel Variant Frequencies: Regeneron One Million Exomes (ME) Project - 983k WGS
+ #longLabel SNV Frequencies: Regeneron One Million Exomes (ME) Project - 983k WGS
#parent varFreqs on
#bigDataUrl /gbdb/$D/varFreqs/me/me.freq.vcf.gz
#visibility pack
#type vcfTabix
#hapClusterEnabled true
#dataVersion 10/04/2023, v1.1.3
#tableBrowser off
#priority 1
track topmed
shortLabel NHLBI TOPMed 10 151k WGS
- longLabel Variant Frequencies: NHLBI TOPMed - 151k WGS
+ longLabel SNV Frequencies: NHLBI TOPMed - 151k WGS
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/_topmed/topmed10.vcf.gz
dataVersion Freeze 10
tableBrowser off
visibility hide
priority 2
track sfariSparkExomes
shortLabel SFARI SPARK 140k WES
- longLabel Variant Frequencies: SFARI SPARK - 140k WES
+ longLabel SNV Frequencies: SFARI SPARK - 140k WES
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/_sfari/SPARK.iWES_v3.2024_08.deepvariant.norm.vcf.gz
dataVersion iWES v3 2024_08
tableBrowser off
visibility hide
priority 2.5
track sfariSparkWgs
shortLabel SFARI SPARK 12k WGS
- longLabel Variant Frequencies: SFARI SPARK - 12,519 WGS
+ longLabel SNV Frequencies: SFARI SPARK - 12,519 WGS
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/_sfari/wgs_12519_genome.deepvariant.norm.vcf.gz
dataVersion iWGS v1.1
visibility hide
priority 2.5
html sfariSparkExomes
tableBrowser off
#track mcps
#shortLabel Mexico City Prospective Study 10k WGS+141k WES
- #longLabel Variant Frequencies: Mexico City Prospective Study (MCPS)
+ #longLabel SNV Frequencies: Mexico City Prospective Study (MCPS)
#tableBrowser off
#parent varFreqs on
#bigDataUrl /gbdb/$D/varFreqs/mcps/mcps.freq.vcf.gz
#visibility pack
#type vcfTabix
#dataVersion May 2023 (v1.2.0)
#priority 3
track tommo60kjpn
shortLabel Japan ToMMo 61k WGS
- longLabel Variant Frequencies: Japan 61k - ToMMo SNV+Indels
+ longLabel SNV Frequencies: Japan 61k - ToMMo SNV+Indels
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/tommo61kjpn/tommo-61kjpn-20250616-GRCh38-snvindel-af-autosome.vcf.gz
visibility hide
dataVersion 2025-06-16
priority 5
track wbbc
shortLabel China WBBC 4.5k WGS
- longLabel Variant Frequencies: Westlake BioBank for Chinese - 4,480 WGS, 4 regional Han groups
+ longLabel SNV Frequencies: Westlake BioBank for Chinese - 4,480 WGS, 4 regional Han groups
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/wbbc/wbbc.vcf.gz
visibility hide
dataVersion Phase I v20210103
priority 5.5
track chinamap
shortLabel China ChinaMAP 10.5k WGS
- longLabel Variant Frequencies: ChinaMAP phase 1 - 10,588 WGS at ~40x, Chinese natural population
+ longLabel SNV Frequencies: ChinaMAP phase 1 - 10,588 WGS at ~40x, Chinese natural population
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/_chinamap/chinamap.vcf.gz
visibility hide
dataVersion Phase 1 (v2020-03.beta)
priority 5.55
tableBrowser off
track tpmi
shortLabel Taiwan TPMI Axiom array
- longLabel Variant Frequencies: Taiwan Precision Medicine Initiative - Axiom TPM1 chip, Han Chinese
+ longLabel SNV Frequencies: Taiwan Precision Medicine Initiative - Axiom TPM1 chip, Han Chinese
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/_tpmi/tpmi.vcf.gz
visibility hide
dataVersion Axiom TPM1 2022-06
priority 5.6
tableBrowser off
track alfaVcf
shortLabel NCBI ALFA 408k mixed
- longLabel Variant Frequencies: NCBI ALFA (dbGaP data) - 408k mixed WGS/WES/array, 163M variants
+ longLabel SNV Frequencies: NCBI ALFA (dbGaP data) - 408k mixed WGS/WES/array, 163M variants
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/alfa/ALFA.vcf.gz
visibility hide
dataVersion R4
priority 4.1
url https://www.ncbi.nlm.nih.gov/snp/$$#frequency_tab
urlLabel NCBI Variation Page
track finngen
parent varFreqs on
visibility hide
type vcfTabix
shortLabel FinnGen R12 500k imputed
- longLabel Variant Frequencies: Finland FinnGen - 500k samples, arrays, imputation used 8.5k WGS
+ longLabel SNV Frequencies: Finland FinnGen - 500k samples, arrays, imputation used 8.5k WGS
priority 4.5
bigDataUrl /gbdb/$D/varFreqs/_finngen/finnge_R12_annotated_variants_v1.vcf.gz
dataVersion R12
tableBrowser off
track ukbb
parent varFreqs on
visibility hide
type vcfTabix
shortLabel UK Biobank 361k imputed
- longLabel Variant Frequencies: UK Biobank Genotypes - 361k White British, Neale Lab Round 2 imputed
+ longLabel SNV Frequencies: UK Biobank Genotypes - 361k White British, Neale Lab Round 2 imputed
priority 4.6
bigDataUrl /gbdb/$D/varFreqs/ukbb/ukbb.vcf.gz
dataVersion Neale Lab R2 08-2018
track swefreq
parent varFreqs on
visibility hide
type vcfTabix
shortLabel Sweden SweGen 1k WGS
- longLabel Variant Frequencies: Sweden SweGen - 1k WGS
+ longLabel SNV Frequencies: Sweden SweGen - 1k WGS
priority 4.7
bigDataUrl /gbdb/$D/varFreqs/_swefreq/swegen_frequencies_fixploidy_GRCh38_20190204.vcf.gz
dataVersion 20251201
tableBrowser off
track gonl
parent varFreqs on
visibility hide
type vcfTabix
shortLabel Netherlands GoNL 498 WGS
- longLabel Variant Frequencies: Genome of the Netherlands - 250 Dutch trios
+ longLabel SNV Frequencies: Genome of the Netherlands - 250 Dutch trios
priority 4.75
bigDataUrl /gbdb/$D/varFreqs/gonl/gonl.vcf.gz
dataVersion GRCh38 1.0
track mgrb
shortLabel Australia MGRB 4k WGS
- longLabel Variant Frequencies: Australia Medical Genome Reference Bank - 4,011 WGS
+ longLabel SNV Frequencies: Australia Medical Genome Reference Bank - 4,011 WGS
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/_mgrb/MGRB.phase3.GRCh38.norm.vcf.gz
dataVersion Phase 3
visibility hide
# no downloads as per Matt Hobbs email Jan 28 2026
tableBrowser off
track gasp
shortLabel GenomeAsia 1.7k SNVs
- longLabel Variant Frequencies: GenomeAsia Pilot - Substitutions
+ longLabel SNV Frequencies: GenomeAsia Pilot - Substitutions
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/ga100k/ga100k.subst.vcf.gz
visibility hide
dataVersion Pilot 2019 (lifted to hg38, May 2026)
track gaspIndel
shortLabel GenomeAsia 1.7k Indels
- longLabel Variant Frequencies: GenomeAsia Pilot - Indels
+ longLabel SNV Frequencies: GenomeAsia Pilot - Indels
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/ga100k/ga100k.indels.vcf.gz
visibility hide
dataVersion Pilot 2019 (lifted to hg38, May 2026)
html gasp
track abraom
shortLabel Brazil ABraOM 1k WGS
- longLabel Variant Frequencies: ABraOM Brazil - 1,171 unrelated individuals
+ longLabel SNV Frequencies: ABraOM Brazil - 1,171 unrelated individuals
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/abraom/abraom.vcf.gz
visibility hide
dataVersion SABE-WGS-1171 Sep 2020
track indigenomes
shortLabel India IndiGenomes 1k WGS
- longLabel Variant Frequencies: IndiGenomes India - 1,029 samples
+ longLabel SNV Frequencies: IndiGenomes India - 1,029 samples
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/indigenomes/IndiGenomes_Variants.vcf.gz
visibility hide
dataVersion IndiGen pilot (Jain 2021)
track genomeindia
shortLabel India GenomeIndia 9.7k WGS
- longLabel Variant Frequencies: GenomeIndia - 9,768 WGS, 83 populations (Bhattacharyya 2025)
+ longLabel SNV Frequencies: GenomeIndia - 9,768 WGS, 83 populations (Bhattacharyya 2025)
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/_genomeindia/genomeindia.vcf.gz
visibility hide
dataVersion 9768GI_SummaryStats (Apr 2025)
priority 4.8
track kova
shortLabel Korea KOVA 5.3k mixed
- longLabel Variant Frequencies: KOVA Korea - 5305 samples, 1.9k WGS+3.4k WES
+ longLabel SNV Frequencies: KOVA Korea - 5305 samples, 1.9k WGS+3.4k WES
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/_kova/kova.v7.vcf.gz
visibility hide
tableBrowser off
dataVersion V7
track npm
shortLabel Singapore NPM 9.7k WGS
- longLabel Variant Frequencies: NPM Singapore - 9,770 WGS samples
+ longLabel SNV Frequencies: NPM Singapore - 9,770 WGS samples
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/_npm/SG10K_Health_r5.3.2.sites.vcf.bgz
visibility hide
tableBrowser off
dataVersion r5.3.2
track hrc
shortLabel HRC 30k WGS
- longLabel Variant Frequencies: Haplotype Reference Consortium - 30k WGS (excl. 1000 Genomes)
+ longLabel SNV Frequencies: Haplotype Reference Consortium - 30k WGS (excl. 1000 Genomes)
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/hrc/hrc.vcf.gz
visibility hide
dataVersion r1.1
track saudi
shortLabel Saudi Genome 302 WGS
- longLabel Variant Frequencies: Saudi Genome Project - 302 WGS samples
+ longLabel SNV Frequencies: Saudi Genome Project - 302 WGS samples
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/saudi/saudi.vcf.gz
visibility hide
dataVersion SHGP (figshare 51297884, 2025)
track schema
shortLabel SCHEMA 121k WES Sz
- longLabel Variant Frequencies: SCHEMA Schizophrenia Exome Meta-Analysis - WES 24k cases, 97k controls
+ longLabel SNV Frequencies: SCHEMA Schizophrenia Exome Meta-Analysis - WES 24k cases, 97k controls
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/schema/SCHEMA_variant_results_withAF.vcf.gz
visibility hide
dataVersion 2022
priority 4.9
url https://schema.broadinstitute.org/
urlLabel SCHEMA Browser
track mxbFreq
shortLabel Mexico Biobank 6k Array
- longLabel Variant Frequencies: Mexico Biobank - 6,011 individuals, genotyping array
+ longLabel SNV Frequencies: Mexico Biobank - 6,011 individuals, genotyping array
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/_mxb/mxb.freq.vcf.gz
visibility hide
dataVersion Nov 2025 (hg38 lift)
tableBrowser off
priority 6
track sgdpFreq
shortLabel SGDP 279 WGS
- longLabel Variant Frequencies: Simons Genome Diversity Project - 279 WGS, 142 populations
+ longLabel SNV Frequencies: Simons Genome Diversity Project - 279 WGS, 142 populations
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/sgdpFreq/sgdp.freq.vcf.gz
visibility hide
dataVersion 2016-12-07 (hg38 lift)
priority 7
track gregor
shortLabel GREGoR R4 3.6k WGS
- longLabel Variant Frequencies: GREGoR Consortium - Release 4, 3,624 WGS samples, rare disease families
+ longLabel SNV Frequencies: GREGoR Consortium - Release 4, 3,624 WGS samples, rare disease families
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/gregor/gregor.vcf.gz
visibility hide
dataVersion R04 (Oct 2025)
priority 8
track hgdp1kFreq
shortLabel gnomAD HGDP+1kG 4k WGS
- longLabel Variant Frequencies: gnomAD HGDP + 1000 Genomes - 4,094 WGS, 80 populations
+ longLabel SNV Frequencies: gnomAD HGDP + 1000 Genomes - 4,094 WGS, 80 populations
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/hgdp1kFreq/hgdp1k.freq.vcf.gz
visibility hide
dataVersion v3.1.2
priority 8
track ga4kSnv
shortLabel GA4K 552 PacBio LR
- longLabel Variant Frequencies: GA4K Children's Mercy - 552 PacBio HiFi WGS, pediatric RD
+ longLabel SNV Frequencies: GA4K Children's Mercy - 552 PacBio HiFi WGS, pediatric RD
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/ga4k/ga4kSnv.vcf.gz
visibility hide
dataVersion Cohen 2022 release
priority 9
track colorsDbSnv
shortLabel CoLoRSdb 1k LR SNV/Ind
- longLabel Variant Frequencies: CoLoRSdb v1.2.0 - 1,027 PacBio HiFi WGS, SNV/indel callset
+ longLabel SNV Frequencies: CoLoRSdb v1.2.0 - 1,027 PacBio HiFi WGS, SNV/indel callset
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/colorsDb/colorsDbSnv.vcf.gz
visibility hide
dataVersion v1.2.0
priority 9.5
track svatalogSnv
shortLabel SVatalog 101 WGS
- longLabel Variant Frequencies: GWAS SVatalog - 101 samples, 10X Genomics linked-read SNPs
+ longLabel SNV Frequencies: GWAS SVatalog - 101 samples, 10X Genomics linked-read SNPs
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/svatalog/svatalog.vcf.gz
visibility hide
dataVersion Chirmade 2025 release
priority 10
track tishkoff180
shortLabel 12 Afr Pops 180 WGS
- longLabel Variant Frequencies: 180 WGS from 12 Indigenous African Populations (Fan 2023)
+ longLabel SNV Frequencies: 180 WGS from 12 Indigenous African Populations (Fan 2023)
type vcfTabix
parent varFreqs on
bigDataUrl /gbdb/$D/varFreqs/_tishkoff/tishkoff180.vcf.gz
visibility hide
dataVersion Cell 2023 (hg19 lift)
tableBrowser off
priority 7.5