53ab3f1e293a91ddf71ec7568f4a6ff827bcd278
lrnassar
  Fri Oct 2 13:52:36 2026 -0700
Native GPN-Star track (Ye, Benegas et al., Nature 2026) on hg38, mm39, galGal6, dm6 and ce11, from the authors' Hugging Face hub. Each model is a multiWig sequence logo plus a four-allele -LLR composite using negateValues. The three hg38 models (V/M/P) sit in predictionScoresSuper via human/gpnStar.ra with /gbdb/$D bigDataUrls so -strict drops them on other human assemblies; the other four get a standalone gpnStar superTrack. The authors' bigWigs come from pyBigWig, whose bwAddIntervalSpanSteps writes the last section of each run 6 bases too long (pyBigWig #166) and makes bigWigAverageOverBed and bigWigCorrelate abort, so gpnStarRebuild.sh re-encodes them with wigToBigWig and gpnStarVerify.sh checks every per-base value is unchanged. Entropy scores and the GenArk-only Arabidopsis set are left out, and pennantIcon still has #TBD placeholders for the newsarch anchor and date. refs #38451

diff --git src/hg/makeDb/trackDb/mouse/mm39/trackDb.ra src/hg/makeDb/trackDb/mouse/mm39/trackDb.ra
index 67a486901a4..4522bc07ca0 100644
--- src/hg/makeDb/trackDb/mouse/mm39/trackDb.ra
+++ src/hg/makeDb/trackDb/mouse/mm39/trackDb.ra
@@ -61,15 +61,17 @@
 html gencodePfam
 
 include vgp577way.trackDb.ra alpha
 
 include tad.ra alpha
 
 track dnaMethylation
 superTrack on
 shortLabel DNA Methylation
 longLabel DNA Methylation
 group regulation
 priority 3
 html dnaMethylation.html
 
 include methbase2.ra alpha
+
+include gpnStar.ra alpha