198c9b8daecc44fbda6a6494c566c723920f030a lrnassar Wed Mar 11 18:25:21 2026 -0700 Fixing a few hundred clear typos with the help of Claude. Some are less important in code comments, but majority of them are in user-facing places. I manually approved 60%+ of the changes and didn't see any that were an incorrect suggestion, at worst it was potentially uncessesary, like a code comment having cant instead of can't. No RM. diff --git src/hg/makeDb/trackDb/mouse/mm9/wgEncodeSydhTfbs.html src/hg/makeDb/trackDb/mouse/mm9/wgEncodeSydhTfbs.html index f7d8244e5a8..a4ffb6431de 100644 --- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeSydhTfbs.html +++ src/hg/makeDb/trackDb/mouse/mm9/wgEncodeSydhTfbs.html @@ -15,31 +15,31 @@ </P> <H2>Display Conventions and Configuration</H2> <P> This track is a multi-view composite track that contains multiple data types (<EM>views</EM>). For each view, there are multiple subtracks that display individually on the browser. Instructions for configuring multi-view tracks are <a href="/goldenPath/help/multiView.html" target="_blank">here</a>. This track contains the following views: <DL> <DT><I>Peaks</I></DT><DD> Regions of signal enrichment based on processed data (normalized data from pooled replicates). Intensity is represented in grayscale, the darker shading shows higher intensity (a solid vertical line -in the peak region represents the the point with the highest signal). +in the peak region represents the point with the highest signal). ENCODE Peaks tables contain fields for statistical significance, including FDR (<a href="/goldenPath/help/qValue.html" target="_blank">qValue</a>).</DD> <DT><I>Signal</I></DT><DD>Density graph (wiggle) of signal enrichment based on processed data.</DD> </DL> <H2>Methods</H2> <P> Cells were grown according to the approved <a href="/ENCODE/protocols/cell/mouse" target="_blank">ENCODE cell culture protocols</a>. For details on the chromatin immunoprecipitation protocol used, see Euskirchen <EM>et. al.</EM>, (2007), Rozowsky <EM>et. al.</EM> (2009) and Auerbach <EM>et. al.</EM> (2009). </P>