198c9b8daecc44fbda6a6494c566c723920f030a
lrnassar
  Wed Mar 11 18:25:21 2026 -0700
Fixing a few hundred clear typos with the help of Claude. Some are less important in code comments, but majority of them are in user-facing places. I manually approved 60%+ of the changes and didn't see any that were an incorrect suggestion, at worst it was potentially uncessesary, like a code comment having cant instead of can't. No RM.

diff --git src/hg/zoo/analyze4d/analyze.c src/hg/zoo/analyze4d/analyze.c
index 154e5787c94..ef572b9ccf0 100644
--- src/hg/zoo/analyze4d/analyze.c
+++ src/hg/zoo/analyze4d/analyze.c
@@ -172,31 +172,31 @@
 
 printf("Considering all species (%s as Reference)\n",spec_name);
 printf("--------------------------------------------\n\n");
 print_totals(total_columns, column_differs, &base_count, "Human");
 
 printf("\nConsidering species which share the site (%s as Reference)\n",spec_name);
 printf("-------------------------------------------------------------\n\n");
 print_totals(total_columns, column_4d_differs, &bases_in_4d, "Human");
 printf("\n");
 
 /* Result of species breakdown */
 for(i=0;i<nspecies;i++)
     {
     if(index==i)
 	continue;
-    printf("Species %-8s occured %5d (%2.2f %)\n",species[i],spec_breakdown[i],(float)(spec_breakdown[i] * 100)/total_columns);
+    printf("Species %-8s occurred %5d (%2.2f %)\n",species[i],spec_breakdown[i],(float)(spec_breakdown[i] * 100)/total_columns);
     }
 return 0;
 }
 
 /* Print the totals for each type of base */
 void print_totals(int total_columns, int column_differs, int ***base_count_a, char *species){
 
 int A,C,T,G,total;
 int **base_count=(*base_count_a);
 
 /* Very inefficient */
 A=base_count[0][0]+base_count[0][1]+base_count[0][2]+base_count[0][3]+base_count[0][4];
 C=base_count[1][0]+base_count[1][1]+base_count[1][2]+base_count[1][3]+base_count[1][4];
 T=base_count[2][0]+base_count[2][1]+base_count[2][2]+base_count[2][3]+base_count[2][4];
 G=base_count[3][0]+base_count[3][1]+base_count[3][2]+base_count[3][3]+base_count[3][4];