a86b49667ad82b0f6c3745379f186f4d5753e368
lrnassar
  Wed Apr 22 13:52:14 2026 -0700
Simplify NMD Escape subtrack longLabels. refs #33737

The '50bp/100bp/intronless/400nt' rule-list became inaccurate after the
Rule 2 refinement (Rule 2 now covers single coding exon + no 3'UTR
intron, not just intronless). Drop the enumerated rules from the
longLabel and defer to the track description page for rule detail.

diff --git src/hg/makeDb/trackDb/human/hg38/nmd.ra src/hg/makeDb/trackDb/human/hg38/nmd.ra
index 19fd1d30d2f..fb8bc855e66 100644
--- src/hg/makeDb/trackDb/human/hg38/nmd.ra
+++ src/hg/makeDb/trackDb/human/hg38/nmd.ra
@@ -1,91 +1,91 @@
 track nmd
 shortLabel NMD Escape
 longLabel NMD Escape: Predicted regions where premature termination codons escape NMD
 group genes
 type bed 4
 visibility hide
 superTrack on
 pennantIcon New red ../goldenPath/newsarch.html#042226 "Released Apr. 22, 2026"
 
         track nmdEscGencode
         shortLabel NMD Escape Gencode
-        longLabel NMD escape 50bp/100bp/intronless/400nt ruleset: Gencode transcripts
+        longLabel NMD escape predictions: Gencode transcripts
         parent nmd off
         bigDataUrl /gbdb/hg38/nmd/nmdEscRegions.bb
         visibility hide
         type bigBed 9 +
         mouseOverField mouseover
         html nmdEscTranscripts
         # this could use a text file one day with the version
         dataVersion Gencode V49
         priority 1.5
 
         track nmdEscNcbiRefSeq
         shortLabel NMD Escape RefSeq
-        longLabel NMD escape 50bp/100bp/intronless/400nt ruleset: NCBI RefSeq Curated transcripts
+        longLabel NMD escape predictions: NCBI RefSeq Curated transcripts
         parent nmd on
         bigDataUrl /gbdb/hg38/nmd/nmdEscNcbiRefSeq.bb
         visibility pack
         type bigBed 9 +
         mouseOverField mouseover
         html nmdEscTranscripts
         # this could use a text file one day with the version
         dataVersion GCF_000001405.40-RS_2025_08
         priority 1.6
 
         track nmdDetectiveA
         shortLabel NMDetective-A
         longLabel NMDetective-A: Random forest prediction of NMD efficiency (Lindeboom 2016)
         parent nmd off
         bigDataUrl /gbdb/hg38/nmd/NMDetectiveA.bw
         type bigWig
         visibility hide
         color 0,128,255
         autoScale off
         viewLimits -1:1
         maxHeightPixels 128:32:8
         html nmdDetective
         priority 2
 
         track nmdDetectiveB
         shortLabel NMDetective-B
         longLabel NMDetective-B: Decision tree prediction of NMD efficiency (Lindeboom 2016)
         parent nmd off
         bigDataUrl /gbdb/hg38/nmd/NMDetectiveB.bw
         type bigWig
         visibility hide
         color 0,128,255
         autoScale off
         viewLimits -1:1
         maxHeightPixels 128:32:8
         html nmdDetective
         priority 3
 
         track nmdDetectiveA_ptc
         shortLabel NMDetective-A PTC
         longLabel NMDetective-A: Random forest NMD efficiency for first out-of-frame PTC
         parent nmd off
         bigDataUrl /gbdb/hg38/nmd/nmdDectA-ptc.bw
         type bigWig
         visibility hide
         color 0,153,102
         autoScale off
         viewLimits -1:1
         maxHeightPixels 128:32:8
         html nmdDetective
         priority 4
 
         track nmdDetectiveB_ptc
         shortLabel NMDetective-B PTC
         longLabel NMDetective-B: Decision tree NMD efficiency for first out-of-frame PTC
         parent nmd off
         bigDataUrl /gbdb/hg38/nmd/nmdDectB-ptc.bw
         type bigWig
         visibility hide
         color 0,153,102
         autoScale off
         viewLimits -1:1
         maxHeightPixels 128:32:8
         html nmdDetective
         priority 5