553f892edf37a754bcf2ae6975be07e8cf8e608d
lrnassar
Tue Jul 1 16:28:15 2025 -0700
Squashing old pennantIcons.
diff --git src/hg/makeDb/trackDb/human/hg38/pseudogenes.ra src/hg/makeDb/trackDb/human/hg38/pseudogenes.ra
index c28dab0c459..e0905560300 100644
--- src/hg/makeDb/trackDb/human/hg38/pseudogenes.ra
+++ src/hg/makeDb/trackDb/human/hg38/pseudogenes.ra
@@ -1,56 +1,55 @@
# pseudogene and parent tracks from Yale PseudoPipe (Jeltje, Jan 2025)
track pseudogenes
shortLabel Pseudogenes
longLabel Pseudogenes and Parents
group genes
visibility hide
type bigbed
compositeTrack on
noScoreFilter on
-pennantIcon New red ../goldenPath/newsarch.html#033125 "Released Mar. 31, 2025"
html pseudogenes.html
track yale_pseudogenes
shortLabel Pseudogenes
longLabel Yale Pseudogenes
type bigBed 12 +
bigDataUrl /gbdb/hg38/pseudogenes/pseudoPipePgenes.bb
visibility pack
itemRgb on
labelFields pgenehugo
defaultLabelFields pgenehugo
searchIndex pgenehugo,name,parenthugo,ppgene,pptx,pensgene,penstx,ensgene,_enstx,ensprot
searchTrix /gbdb/hg38/pseudogenes/pseudoPipePgenes.ix
labelSeparator " "
html pseudogenes.html
mouseOver Pseudogene type: ${pgeneType}
Parent gene ID: ${parenthugo}
Parent transcript ID: ${enstxurl}
parent pseudogenes
priority 2
track yale_parents
shortLabel Pseudogene Parents
longLabel Yale Pseudogene Parents
type bigBed 9 +
bigDataUrl /gbdb/hg38/pseudogenes/pseudoPipeParents.bb
visibility pack
itemRgb on
labelFields hugo
searchIndex hugo,name
searchTrix /gbdb/hg38/pseudogenes/pseudoPipeParents.ix
labelSeparator " "
html pseudogenes.html
mouseOver Gene type: ${geneType}
ID: ${name}
Pseudogene position: ${url}
parent pseudogenes
skipEmptyFields on
priority 1
searchName yale_pseudogenes
searchTable yale_pseudogenes
searchType bigBed
searchPriority 27.01
searchName yale_parents
searchTable yale_parents
searchType bigBed
searchPriority 27.02