f4d967492fedb59d2e528cf196e35c1da248ae96 lrnassar Fri Oct 2 07:15:47 2026 -0700 Quarterly pennant cleanup: removing New/Updated pennantIcons released before July 2026 (strVar, nmd, promoterAi, primateAi, mpra, varaico). No RM. diff --git src/hg/makeDb/trackDb/human/promoterAi.ra src/hg/makeDb/trackDb/human/promoterAi.ra index 09f8e65c955..216e1515711 100644 --- src/hg/makeDb/trackDb/human/promoterAi.ra +++ src/hg/makeDb/trackDb/human/promoterAi.ra @@ -1,100 +1,99 @@ track promoterAi shortLabel PromoterAI longLabel PromoterAI Promoter Variant Impact Scores (zoom for exact score) type bigWig parent predictionScoresSuper compositeTrack on tableBrowser off visibility hide -pennantIcon New red ../goldenPath/newsarch.html#050126 "Released May 1, 2026" track promoterAiA shortLabel Mutation: A longLabel PromoterAI: Mutation is A type bigWig parent promoterAi on visibility dense bigDataUrl /gbdb/$D/_promoterAi/a.bw maxHeightPixels 128:40:8 viewLimits -1:1 viewLimitsMax -1:1 maxWindowToDraw 10000000 maxWindowToQuery 500000 mouseOverFunction noAverage alwaysZero on autoScale off color 200,0,0 altColor 0,0,200 track promoterAiC shortLabel Mutation: C longLabel PromoterAI: Mutation is C type bigWig parent promoterAi on visibility dense bigDataUrl /gbdb/$D/_promoterAi/c.bw maxHeightPixels 128:40:8 viewLimits -1:1 viewLimitsMax -1:1 maxWindowToDraw 10000000 maxWindowToQuery 500000 mouseOverFunction noAverage alwaysZero on autoScale off color 200,0,0 altColor 0,0,200 track promoterAiG shortLabel Mutation: G longLabel PromoterAI: Mutation is G type bigWig parent promoterAi on visibility dense bigDataUrl /gbdb/$D/_promoterAi/g.bw maxHeightPixels 128:40:8 viewLimits -1:1 viewLimitsMax -1:1 maxWindowToDraw 10000000 maxWindowToQuery 500000 mouseOverFunction noAverage alwaysZero on autoScale off color 200,0,0 altColor 0,0,200 track promoterAiT shortLabel Mutation: T longLabel PromoterAI: Mutation is T type bigWig parent promoterAi on visibility dense bigDataUrl /gbdb/$D/_promoterAi/t.bw maxHeightPixels 128:40:8 viewLimits -1:1 viewLimitsMax -1:1 maxWindowToDraw 10000000 maxWindowToQuery 500000 mouseOverFunction noAverage alwaysZero on autoScale off color 200,0,0 altColor 0,0,200 track promoterAiOverlaps shortLabel PromoterAI overlaps longLabel PromoterAI: Positions with >1 score due to overlapping transcripts type bigBed 9 + parent promoterAi on visibility dense bigDataUrl /gbdb/$D/_promoterAi/overlaps.bb mouseOverField _mouseOver itemRgb on maxWindowToDraw 10000000 maxItems 50000 filterByRange.scoreDiff on filter.scoreDiff 0.01 filterLimits.scoreDiff 0:2 filterLabel.scoreDiff Minimum score difference across transcripts scoreFilter 0 scoreFilterLimits 0:1000 scoreLabel Absolute PromoterAI score * 1000