e314363411293556f33418abe8923ad1e8bc496a
markd
  Fri Oct 2 21:36:04 2026 -0700
Revert the TSS nesting on master; it lives on superTrackNesting. refs #35528

Putting PRO-cap and ProCapNet inside a transcriptionStart superTrack needs the
nesting fix in #38460, which is not released. These tracks were released in
3bee9e40921, so on beta and the RR hgTrackDb would drop the container and
trackDbToTxt would write an hs1 curated hub whose members name a parent stanza
that is not there.

The work is on the superTrackNesting branch and can come back once #38460 ships.

diff --git src/hg/makeDb/trackDb/human/hg38/transcriptionStart.ra src/hg/makeDb/trackDb/human/hg38/transcriptionStart.ra
index ac9b06e52ed..1a362b0ba74 100644
--- src/hg/makeDb/trackDb/human/hg38/transcriptionStart.ra
+++ src/hg/makeDb/trackDb/human/hg38/transcriptionStart.ra
@@ -1,34 +1,26 @@
 # Generated by hg/makeDb/outside/proCapNet/proCapNetTrackDb for hg38.
 # Do not edit by hand, edit the script and regenerate.
 
-track transcriptionStart
-superTrack on show
-group rna
-shortLabel Transcription Initiation (TSS)
-longLabel Transcription initiation (TSS)
-
 track encode4ProCap
 superTrack on show
-    parent transcriptionStart
 group rna
 shortLabel PRO-cap
 longLabel PRO-cap nascent RNA transcription start sites from ENCODE 4
 
 track proCapNet
 superTrack on show
-    parent transcriptionStart
 group rna
 shortLabel ProCapNet
 longLabel ProCapNet predicted PRO-cap
 
 track encode4ProCap_A673_procap
 superTrack encode4ProCap full
 container multiWig
 aggregate solidOverlay
 showSubtrackColorOnUi on
 type bigWig
 autoScale on
 alwaysZero on
 maxHeightPixels 100:40:8
 windowingFunction maximum
 configurable on