Commits for markd

v499_base to v500_preview (2026-06-01 to 2026-06-08) v500

bea3a22e1454e8fee62a026ffcec8c57af4005be Sat Jun 6 13:46:13 2026 -0700

• added -tsv option blastToPsl and blastXmlToPsl to allow parsing scores with other programs
  • src/hg/blastToPsl/blastToPsl.c - lines changed 5, context: html, text, full: html, text
  • src/hg/blastToPsl/blastXmlToPsl.c - lines changed 5, context: html, text, full: html, text
  • src/hg/blastToPsl/pslBuild.c - lines changed 4, context: html, text, full: html, text
  • src/hg/blastToPsl/pslBuild.h - lines changed 1, context: html, text, full: html, text
  • src/hg/blastToPsl/tests/expected/mrna1TsvTest.psl - lines changed 12, context: html, text, full: html, text
  • src/hg/blastToPsl/tests/expected/mrna1TsvTest.tsv - lines changed 13, context: html, text, full: html, text
  • src/hg/blastToPsl/tests/expected/protMrnaTsvTest.psl - lines changed 186, context: html, text, full: html, text
  • src/hg/blastToPsl/tests/expected/protMrnaTsvTest.tsv - lines changed 187, context: html, text, full: html, text
  • src/hg/blastToPsl/tests/makefile - lines changed 17, context: html, text, full: html, text

a19ed7de71135030a5f88e8bc7098db99fa3e96a Mon Jun 8 09:27:19 2026 -0700

• *** empty log message ***
  • src/hg/blastToPsl/tests/input/blastn-ncbi-seqs.xml - lines changed 118, context: html, text, full: html, text

051d8d750d9ee269ea2a26575a90a8591fb4cd84 Mon Jun 8 09:34:32 2026 -0700

• added option to get accession with version from blast xml
  • src/hg/blastToPsl/blastXmlToPsl.c - lines changed 18, context: html, text, full: html, text
  • src/hg/blastToPsl/tests/expected/hitIdIdTest.psl - lines changed 2, context: html, text, full: html, text
  • src/hg/blastToPsl/tests/makefile - lines changed 7, context: html, text, full: html, text