cff06e342525a24806d958cf8af28e9f54f1503c max Sat Jul 25 18:25:07 2026 -0700 mei: change item name format to <class>-<svLen>:<carrierCount> diff --git src/hg/makeDb/scripts/mei/meiDeepmei1kgVcfToBed.py src/hg/makeDb/scripts/mei/meiDeepmei1kgVcfToBed.py index 9e9aa0c97e3..fe9056ef3a2 100755 --- src/hg/makeDb/scripts/mei/meiDeepmei1kgVcfToBed.py +++ src/hg/makeDb/scripts/mei/meiDeepmei1kgVcfToBed.py @@ -115,31 +115,31 @@ AN += 1 hapCalled += 1 if h == "1": altAC += 1 hapAlt += 1 if hapCalled > 0: sampleCount += 1 if hapAlt > 0: carrierCount += 1 carrierSamples.append(sampleName) altAF = (altAC / AN) if AN > 0 else 0.0 score = max(0, min(1000, int(round(altAF * 1000)))) color = COLOR_BY_CLASS[cls] - name = f"INS-{cls}-{carrierCount}" + name = f"{cls}-{carrierCount}" out.write("\t".join([ chrom, str(chromStart), str(chromEnd), name, str(score), ".", str(chromStart), str(chromEnd), color, cls, str(altAC), str(AN), f"{altAF:.6f}",