18bdb7e650b738210115316787b9691f4d4c6969 max Fri Jul 4 05:21:50 2025 -0700 adding bionano tracks to hg19 and hg38, refs #36033 diff --git src/hg/makeDb/trackDb/human/exomeProbesets.html src/hg/makeDb/trackDb/human/exomeProbesets.html index a2857d72837..2365d89536d 100755 --- src/hg/makeDb/trackDb/human/exomeProbesets.html +++ src/hg/makeDb/trackDb/human/exomeProbesets.html @@ -1,25 +1,28 @@
This set of tracks shows the genomic positions of probes and targets from a full suite of in-solution-capture target enrichment exome kits for Next Generation Sequencing (NGS) applications. Also known as exome sequencing or whole exome sequencing (WES), this technique allows high-throughput parallel sequencing of all exons (e.g., coding regions of genes which affect protein function), constituting about 1% of the human genome, or approximately 30 million base pairs.
+It also includes a track with the sites used by the +Bionano Optical Genome Mapping system..
+ The tracks are intended to show the major differences in target genomic regions between the different exome capture kits from the major players in the NGS sequencing market: Illumina Inc., Roche NimbleGen Inc., Agilent Technologies Inc., MGI Tech, Twist Bioscience, and Integrated DNA Technologies Inc..
Items are shaded according to manufacturing company:
For downloading the data, the annotations are stored in bigBed files that can be accessed at our download directory. Regional or the whole genome text annotations can be obtained using our utility bigBedToBed. Instructions for downloading utilities can be found here.
Thanks to Illumina (U.S.), Roche NimbleGen, Inc. (U.S.), Agilent Technologies (U.S.), MGI Tech (Beijing Genomics Institute, China), Twist Bioscience (U.S.), and Integrated DNA Technologies (IDT), -Inc. (U.S.) for making these data available and to Tiana Pereira, Pranav Muthuraman, Began Nguy +Inc. (U.S.), and Bionano Genomics (U.S.) for making these data available and to Tiana Pereira, Pranav Muthuraman, Began Nguy and Anna Benet-Pages for enginering these tracks.