a38a591af4c79bd4853bf4e55fbb52887ad3a03e max Fri Jul 4 05:24:40 2025 -0700 fixing typo in previous commit, refs #36033 diff --git src/hg/makeDb/trackDb/human/exomeProbesets.html src/hg/makeDb/trackDb/human/exomeProbesets.html index 2365d89536d..96e6ecbc48c 100755 --- src/hg/makeDb/trackDb/human/exomeProbesets.html +++ src/hg/makeDb/trackDb/human/exomeProbesets.html @@ -1,38 +1,40 @@ <h1>Description</h1> <p> This set of tracks shows the genomic positions of <b>probes</b> and <b>targets</b> from a full suite of in-solution-capture target enrichment exome kits for <b>Next Generation Sequencing (NGS)</b> applications. Also known as <b>exome sequencing</b> or <b>whole exome sequencing (WES)</b>, this technique allows high-throughput parallel sequencing of all exons (e.g., coding regions of genes which affect protein function), constituting about 1% of the human genome, or approximately 30 million base pairs. </p> -<p>It also includes a track with the sites used by the -<a target=blank href="https://www.bionano.com"><b>Bionano Optical Genome Mapping system.</a>. <p> - The tracks are intended to show the major differences in target genomic regions between the different exome capture kits from the major players in the NGS sequencing market: <a target=blank href="https://www.illumina.com"><b>Illumina Inc.</b></a>, <a target=blank href="https://www.roche.com"><b>Roche NimbleGen Inc.</b></a>, <a target=blank href="https://www.agilent.com"><b>Agilent Technologies Inc.</b></a>, <a target=blank href="https://en.mgi-tech.com"><b>MGI Tech</b></a>, <a target=blank href="https://www.twistbioscience.com"><b>Twist Bioscience</b></a>, and <a target=blank href="https://www.idtdna.com"><b>Integrated DNA Technologies Inc.</b></a>. </p> +<p>This set also includes a track with the CTTAAG sites used by the +<a target=blank href="https://www.bionano.com">Bionano Optical Genome Mapping system.</a>, +an assay to detect structure variants. +</p> + <h1>Display Conventions and Configuration</h1> <p> Items are shaded according to manufacturing company: <ul> <li><b><font color="#FFB000">IDT (Integrated DNA Technologies)</font></b></li> <li><b><font color="#FE6100">Twist Biosciences</font></b></li> <li><b><font color="#DC267F">MGI Tech (Beijing Genomics Institute)</font></b></li> <li><b><font color="#648FFF">Roche NimbleGen</font></b></li> <li><b><font color="#785EF0">Agilent Technologies</font></b></li> <li><b><font color="#163EA4">Illumina</font></b></li> </ul> </p> <p>