d1e99290a854df9b05063c10c91466f6e8fa034a max Sun Apr 5 23:12:31 2026 -0700 Revert "renaming mpra supertrack to regulatory functional assays, suggested by Katie Pollard, refs #34284" This reverts commit 93ffd483ab062d09df2743ccc0e32013e91fbd76. diff --git src/hg/makeDb/trackDb/human/hg38/regfunc.ra src/hg/makeDb/trackDb/human/hg38/mpra.ra similarity index 74% rename from src/hg/makeDb/trackDb/human/hg38/regfunc.ra rename to src/hg/makeDb/trackDb/human/hg38/mpra.ra index 913e3f82d3f..13acff00017 100644 --- src/hg/makeDb/trackDb/human/hg38/regfunc.ra +++ src/hg/makeDb/trackDb/human/hg38/mpra.ra @@ -1,32 +1,32 @@ -track regfunc -shortLabel Regulatory functional assays -longLabel Regulatory functional assays - MPRAs -group regulation +track mpra +shortLabel MPRAs +longLabel Massively Parallel Reporter Assays +group phenDis type bed 4 visibility hide superTrack on track mprabase shortLabel MPRA Base longLabel MPRAs: MPRA Base Enhancer Elements type bigBed 9 + 9 - bigDataUrl /gbdb/hg38/regfunc/mprabase/mprabase.bb - parent regfunc on + bigDataUrl /gbdb/hg38/mpra/mprabase/mprabase.bb + parent mpra visibility pack priority 1 itemRgb on mouseOver "$cell_line | $assay | Score: $raw_score | %tile: $percentile_rank | $citation" urls PMID="https://www.ncbi.nlm.nih.gov/pubmed/$$" track mpraVarDb shortLabel MPRAVarDB longLabel MPRAs: MPRAVarDB - MPRA-tested Regulatory Variant Effects - grey is non-significant - parent regfunc on - bigDataUrl /gbdb/hg38/regfunc/mpravardb/mpravardb.bb + parent mpra on + bigDataUrl /gbdb/hg38/mpra/mpravardb.bb type bigBed 9 + itemRgb on visibility dense mouseOverField _mouseOverLog2FC,_mouseOverPvalue,_mouseOverFdr mouseOver Ref: $ref Alt: $alt Cell: $cellLine log2FC: $_mouseOverLog2FC p: $_mouseOverPvalue FDR: $_mouseOverFdr skipFields _mouseOverLog2FC,_mouseOverPvalue,_mouseOverFdr priority 2