6bb46ba4e8d91ab3670d354ef18d8bf5321ec9ee max Thu Mar 12 07:15:29 2026 -0700 Add WebSTR short tandem repeat track under new strVar supertrack New track with 1.7M STR loci from WebSTR EnsembleTR panel (hg38), with allele frequency data for 5 populations from 1000 Genomes (3,550 samples). Includes conversion script, .as schema, trackDb, and full HTML documentation, refs #36652 Co-Authored-By: Claude Opus 4.6 diff --git src/hg/makeDb/trackDb/human/hg38/strVar.html src/hg/makeDb/trackDb/human/hg38/strVar.html new file mode 100644 index 00000000000..5feb265b958 --- /dev/null +++ src/hg/makeDb/trackDb/human/hg38/strVar.html @@ -0,0 +1,27 @@ +

Description

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+The Short Tandem Repeat (STR) Variation super track is a collection of tracks +displaying population-level genetic variation at short tandem repeat (STR) loci across +the human genome. STRs, also known as microsatellites, are consecutive repetitions of +1-6 nucleotide motifs. They are among the most polymorphic loci in the genome due to high +rates of repeat unit insertions and deletions caused primarily by polymerase slippage +during DNA replication.

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+STR variation has been implicated in a range of human traits and diseases, +including gene expression regulation, cancer risk, and neurodevelopmental disorders. +This super track provides genome-wide STR annotations and allele frequency data from +large-scale population cohorts.

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Tracks in this collection

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Credits

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+Thanks to the data providers of the individual tracks listed above. +See each track's documentation page for specific credits.