66419809158cb8192f2d8b19b43f4484a4d4c354
max
Mon Apr 6 08:57:28 2026 -0700
tdb fix
diff --git src/hg/makeDb/trackDb/human/lrSv.ra src/hg/makeDb/trackDb/human/lrSv.ra
index 66852cc8a4a..ca1304a9380 100644
--- src/hg/makeDb/trackDb/human/lrSv.ra
+++ src/hg/makeDb/trackDb/human/lrSv.ra
@@ -47,54 +47,54 @@
filterLabel.insType Insertion/Deletion Type
filterValues.family Alu,HERVK,L1,LTR5_Hs,SVA
filterType.family multipleListOr
filterLabel.family Transposon Family
filterByRange.svLen on
filterLabel.svLen SV Length
filterByRange.alleleFreq on
filterLimits.alleleFreq 0:1
filterLabel.alleleFreq Allele Frequency
filterByRange.alleleCount on
filterLabel.alleleCount Allele Count
skipEmptyFields on
track tommoJpSv
parent lrSv
- bigDataUrl /gbdb/hg38/lrSv/tommoJp.bb
+ bigDataUrl /gbdb/$D/lrSv/tommoJp.bb
shortLabel ToMMo Japanese SVs
longLabel Structural Variants from 333 Japanese Individuals (ToMMo, 111 Trios)
type bigBed 9 +
itemRgb on
visibility dense
mouseOver $name ($svType) len=$svLen AF=$alleleFreq AC=$alleleCount
filterValues.svType DEL,INS
filterType.svType multipleListOr
filterLabel.svType SV Type
filter.svLen 51:99980
filterByRange.svLen on
filterLabel.svLen SV Length
filter.alleleFreq 0:1
filterByRange.alleleFreq on
filterLimits.alleleFreq 0:1
filterLabel.alleleFreq Allele Frequency
filter.alleleCount 0:444
filterByRange.alleleCount on
filterLabel.alleleCount Allele Count
track aou1kSv
parent lrSv
- bigDataUrl /gbdb/hg38/lrSv/aou1k.bb
+ bigDataUrl /gbdb/$D/lrSv/aou1k.bb
shortLabel AoU 1K SVs
longLabel Structural Variants from 1,027 AoU Individuals (PacBio HiFi Long-read)
type bigBed 9 +
itemRgb on
visibility dense
mouseOver $name ($svType) len=$svLen AF_AFR=$afAfr AF_EUR=$afEur
filterValues.svType DEL,INS
filterType.svType multipleListOr
filterLabel.svType SV Type
#filter.svLen 50:9998
filterByRange.svLen on
filterLabel.svLen SV Length
#filter.afAfr 0:1
filterByRange.afAfr on
filterLimits.afAfr 0:1