a442752cfb1738add6158966133902bdc47e69d0
max
  Sun May 25 14:11:39 2025 -0700
adding ucnebase to unusual conservation track, refs #35703

diff --git src/hg/makeDb/trackDb/human/hg38/unusualcons.ra src/hg/makeDb/trackDb/human/hg38/unusualcons.ra
index 921797f6f38..857ad497436 100644
--- src/hg/makeDb/trackDb/human/hg38/unusualcons.ra
+++ src/hg/makeDb/trackDb/human/hg38/unusualcons.ra
@@ -1,69 +1,93 @@
 track unusualcons
 compositeTrack on
 shortLabel Unusually Conserved
 longLabel Unusually Conserved Regions - Ultracons, HARs, etc.
 type bed
 group compGeno
 
     track ultras
     shortLabel Ultracons
     longLabel Ultracons: 481 Ultraconserved regions - 100% identical in human, mouse and rat, > 200bp
     parent unusualcons on
     type bigBed 4
     bigDataUrl /gbdb/hg38/unusualcons/hg38.ultraConserved.bb
 
+    track ucneClusters
+    shortLabel UCNE Clusters
+    longLabel UCNEBase: 239 Cluster of UCNE elements
+    parent unusualcons on
+    type bigBed 4 +
+    bigDataUrl /gbdb/hg38/unusualcons/clusters.bb
+    url https://epd.expasy.org/ucnebase/view.php?data=cluster&entry=$$
+
+    track ucneChicken
+    shortLabel UCNE Chicken
+    longLabel UCNEBase: 4351 Chicken-conserved elements
+    parent unusualcons on
+    type bigBed 4 +
+    bigDataUrl /gbdb/hg38/unusualcons/chicken.bb
+    url https://epd.expasy.org/ucnebase/view.php?data=ucne&entry=$$
+
+    track ucneParalogs
+    shortLabel UCNE Paralogs
+    longLabel UCNEBase: 987 Paralogous elements
+    parent unusualcons on
+    type bigBed 4 +
+    bigDataUrl /gbdb/hg38/unusualcons/paralogs.bb
+    url url="https://epd.expasy.org/ucnebase/view.php?data=ucne&entry=$$"
+
     track ultraZoo
     shortLabel UltraZoos
     longLabel UltraZoos: 4552 Ultraconserved regions in Zoonomia alignment - 100% identical in 235 species, >20bp
     parent unusualcons on
     type bigBed 4 +
     bigDataUrl /gbdb/hg38/unusualcons/zooUCEs.bigBed
 
     track har2649
     shortLabel HARs
     longLabel HARs: 2649 Human Accelerated Regions (HARs) merged from various publications by the Pollard Lab
     parent unusualcons on
     type bigBed 4 +
     bigDataUrl /gbdb/hg38/unusualcons/nchaes_merged_hg38.bb
 
     track hars312
     shortLabel ZooHARs
     longLabel ZooHARs: 312 Human Accelerated Regions (HARs) from Zoonomia alignments
     parent unusualcons on
     type bigBed 4
     bigDataUrl /gbdb/hg38/unusualcons/KeoughTableS1.bb
 
     track haqers
     shortLabel HAQERS
     longLabel HAQERS: 1580 Human Ancestor Quickly Evolved Regions
     parent unusualcons on
     type bigBed 4 +
     bigDataUrl /gbdb/hg38/unusualcons/haqers.bb
 
     track hcondels
     shortLabel Long hConDels
     longLabel long hConDels: 583 Long Human Conserved Deletions - present in chimp and macaque but deleted in humans
     parent unusualcons on
     type bigBed 4 +
     bigDataUrl /gbdb/hg38/unusualcons/hcondels583.bb
 
     track shorthcondels
     shortLabel Short hConDels
     longLabel short hConDels: 10032 Short Human hCondels - Human Conserved Deletions < 40bp
     parent unusualcons on
     type bigBed 4 +
     bigDataUrl /gbdb/hg38/unusualcons/hcondels.bb
 
     track zooRoccs
     shortLabel ZooRoCCs
     longLabel Zoonomia RoCCs: Runs of contiguous phyloP constraint
     parent unusualcons on
     type bigBed 4 +
     bigDataUrl /gbdb/hg38/unusualcons/RoCCs.bigBed
 
     track zooUnicorns
     shortLabel ZooUNICORNs
     longLabel Zoonomia UNICORNs: Unannotated Intergenic Constrained Regions
     parent unusualcons on
     type bigBed 4 +
     bigDataUrl /gbdb/hg38/unusualcons/UNICORNs.bigBed