dc1e0e76dbe49861bd0ebe8db64e27f587737794
max
  Mon Mar 30 15:40:03 2026 -0700
adding two more phased variants tracks, refs #37306

diff --git src/hg/makeDb/trackDb/human/phasedVars.ra src/hg/makeDb/trackDb/human/phasedVars.ra
index 316a18e02da..3cfd8844902 100644
--- src/hg/makeDb/trackDb/human/phasedVars.ra
+++ src/hg/makeDb/trackDb/human/phasedVars.ra
@@ -1,55 +1,77 @@
 track phasedVars
 shortLabel Phased Variants
 longLabel Phased Variants from various sequencing projects
 group varRep
 type bed 12
 visibility hide
 superTrack on
 pennantIcon New red ../goldenPath/newsarch.html#020926 "Released Feb. 09, 2026"
 
         track mexbb
         shortLabel Mexico Biobank, 6k Array
         longLabel Phased Variants: Mexico Biobank 6k Array
         tableBrowser off
         parent phasedVars on
         bigDataUrl /gbdb/$D/phasedVars/mexbb/MXBv2.vcf.gz
         visibility pack
         type vcfTabix
         hapClusterEnabled true
         dataVersion Nov 2025 (hg38 lift)
         priority 1
         html phasedVars.html
 
         track hgdp
         shortLabel Human Genome Diversity Project, 1k WGS
         longLabel Phased Variants: Human Genome Diversity Project (HGDP) - 1043 samples, isolated populations
         type vcfTabix
         parent phasedVars on
         bigDataUrl /gbdb/$D/phasedVars/hgdp/hgdp_wgs.20190516.full.vcf.gz
         visibility pack
         dataVersion 2019-05-16
         priority 2
         html phasedVars.html
 
         track sgdp
         shortLabel Simons Genome Diversity Project 0.3k WGS
         longLabel Phased Variants: Simons Genome Diversity Project - 279 samples, unmixed populations
         type vcfTabix
         parent phasedVars on
         bigDataUrl /gbdb/$D/phasedVars/sgdp/SGDP.nh2.vcf.gz
         visibility pack
         dataVersion 2016-12-07 public (hg38 lift)
         priority 4
         html phasedVars.html
 
         track hgdp1k
         shortLabel gnomAD HGDP+1000G 4k WGS
         longLabel Phased Variants: gnomAD HGDP + 1000 genomes callset - 4094 whole genomes, 80 populations
         type vcfTabix
         parent phasedVars on
         bigDataUrl /gbdb/$D/phasedVars/hgdp1k/gnomad.genomes.v3.1.2.hgdp_tgp.vcf.gz
         visibility pack
         dataVersion v 3.1.2
         priority 5
         html phasedVars.html
 
+        track han945SvVcf
+        parent phasedVars
+        bigDataUrl /gbdb/$D/phasedVars/han945genotypes.vcf.gz
+        shortLabel SVs from 945 Han Chinese
+        longLabel Phased Variants: Structural variants from 945 Han Chinese SVs
+        type vcfTabix
+        visibility dense
+        release alpha
+        priority 10
+
+        track lrSv1kgOntPhased
+        parent phasedVars
+        bigDataUrl /gbdb/$D/phasedVars/1kgOntPhased.vcf.gz
+        shortLabel SVs from 1000G ONT
+        longLabel Phased Variants: Structural variants from 1,019 diverse humans (1000 Genomes Vienna ONT, shapeit5)
+        type vcfTabix
+        visibility dense
+        sampleColorFile Superpopulation=/gbdb/$D/phasedVars/1kgOntPhased.superpopColors.txt
+        sampleMetadataFile /gbdb/$D/phasedVars/1kgOntPhased.sampleMeta.txt
+        release alpha
+        priority 11
+