8faeb3cba60c7cb842bc17c17a57c9b53ef1b478 max Tue Apr 21 02:51:32 2026 -0700 ncbiCloneEndsCH1073: add NCBI CH1073 BAC library clone end placements track on danRer11, refs #35059 210,777 unique-concordant clone-insert placements from NCBI's CH1073 (RZPD-1073 / DanioKey) library clone report. Separate from the existing bacEndPairsLift (danRer4 -> danRer11 UCSC-BLAT lift), which is left in place. Co-Authored-By: Claude Opus 4.7 (1M context) diff --git src/hg/makeDb/trackDb/zebrafish/danRer11/ncbiCloneEndsCH1073.ra src/hg/makeDb/trackDb/zebrafish/danRer11/ncbiCloneEndsCH1073.ra new file mode 100644 index 00000000000..83903031180 --- /dev/null +++ src/hg/makeDb/trackDb/zebrafish/danRer11/ncbiCloneEndsCH1073.ra @@ -0,0 +1,20 @@ +track ncbiCloneEndsCH1073 +shortLabel NCBI CH1073 BAC +longLabel NCBI CH1073 BAC library clone end placements, unique concordant (end-seq) +group map +visibility hide +type bigBed 6 + +bigDataUrl /gbdb/danRer11/ncbiCloneEndsCH1073/CH1073.bb +color 60,100,160 +url https://zfin.org/search?q=$$ +urlLabel ZFIN clone search: +filterValues.concordant TRUE,FALSE +filterLabel.concordant End-pair concordance +filterType.concordant multipleListOnlyOr +filterValues.unique TRUE,FALSE +filterLabel.unique Unique placement +filterType.unique multipleListOnlyOr +filterValues.oversize TRUE,FALSE +filterLabel.oversize Oversize placement (>500kb) +filterType.oversize multipleListOnlyOr +skipFields score,strand,placementMethod