38d5c1e91f3a867c589da441f549c9d46bc9b9f4 mspeir Mon Jul 20 14:05:31 2026 -0700 Add singleCellSignalsPeaks track to hg38 Native faceted composite built from the per-cell-type signal (bigWig) and peak (bigBed/bigNarrowPeak) tracks of the UCSC Cell Browser single-cell ATAC datasets, re-parented under one track in the regulation group. 936 subtracks across 9 datasets. Data files live in /hive/data/genomes/hg38/bed/singleCellSignalsPeaks and are served via a /gbdb/hg38/bbi symlink; the .ra is regenerated from the Cell Browser hub build by makeDb/scripts/singleCellSignalsPeaks/makeSingleCellSignalsPeaksRa.py. refs #37820 Co-Authored-By: Claude Opus 4.8 (1M context) diff --git src/hg/makeDb/trackDb/human/hg38/trackDb.ra src/hg/makeDb/trackDb/human/hg38/trackDb.ra index cf931714713..8d09075b268 100644 --- src/hg/makeDb/trackDb/human/hg38/trackDb.ra +++ src/hg/makeDb/trackDb/human/hg38/trackDb.ra @@ -42,30 +42,32 @@ include liftOver.ra include exomeProbesets.ra include chm13LiftOver.ra include reMap.ra include recombRate.ra include fantom5.ra include nuMtSeq.ra include gnomad.pext.ra include rnaMod.ra alpha include m6aAtlas.ra alpha +include singleCellSignalsPeaks.ra alpha + track miRnaAtlas compositeTrack on shortLabel miRNA Tissue Atlas longLabel Tissue-Specific microRNA Expression from Two Individuals type bigBarChart group expression maxLimit 52000 barChartLabel Tissue configurable off subGroup1 view View a_A=Sample1 b_B=Sample2 track miRnaAtlasSample1 type bigBarChart visibility pack parent miRnaAtlas