8165601dddc27978eb4a2fe2654ba81212e30473
braney
Sat May 31 11:46:07 2025 -0700
hgGene changes for quickLift
diff --git src/hg/hgGene/pathways.c src/hg/hgGene/pathways.c
index edd7da8f3c4..e20711c177d 100644
--- src/hg/hgGene/pathways.c
+++ src/hg/hgGene/pathways.c
@@ -167,31 +167,31 @@
{
sqlSafef(condStr, sizeof(condStr), "kgID='%s'", geneId);
spID = sqlGetField(sqlGetDatabase(conn), "kgXref", "spID", condStr);
}
if (spID != NULL)
{
/* convert splice variant UniProt ID to its main root ID */
chp = strstr(spID, "-");
if (chp != NULL) *chp = '\0';
hPrintf(
"
Protein %s (Reactome details) participates in the following event(s):
"
, spID, spID);
- conn2= hAllocConn(database);
+ conn2= hAllocConn(sqlGetDatabase(conn));
sqlSafef(query2,sizeof(query2),
"select eventID, eventDesc from proteome.spReactomeEvent where spID='%s'", spID);
sr2 = sqlMustGetResult(conn2, query2);
row2 = sqlNextRow(sr2);
while (row2 != NULL)
{
eventID = row2[0];
eventDesc = row2[1];
hPrintf(
"%s %s
\n",
eventID, eventID, eventDesc);
row2 = sqlNextRow(sr2);
}
sqlFreeResult(&sr2);
hFreeConn(&conn2);