0ccef37cf87b5f08c05959db43e48c8d91fba4db gperez2 Thu Mar 6 12:37:07 2025 -0800 Adding docker page links to help pages, refs #34915 diff --git src/hg/htdocs/goldenPath/help/gbic.html src/hg/htdocs/goldenPath/help/gbic.html index 4e8cc27d014..ad77eb578a2 100755 --- src/hg/htdocs/goldenPath/help/gbic.html +++ src/hg/htdocs/goldenPath/help/gbic.html @@ -17,31 +17,32 @@ <h6><a href='#how-does-the-gbic-program-work'>How does the GBiC program work?</a></h6> <h6><a href='#gbic-commands'>GBiC Commands</a></h6> <h6><a href='#all-gbic-options'>All GBiC options</a></h6> <h6><a href='#credits'>Credits</a></h6> <a name='what-is-genome-browser-in-the-cloud'></a> <h2>What is Genome Browser in the Cloud?</h2> <p> The Genome Browser in the Cloud (GBiC) program is a convenient tool that automates the setup of a UCSC Genome Browser mirror. The GBiC program is for users who want to set up a full mirror of the UCSC Genome Browser on their server/cloud instance, rather than using <a href='gbib.html' title=''>Genome Browser in a Box</a> (GBIB) or our public website. Please see the <a href='mirror.html#considerations-before-installing-a-genome-browser' title=''>Installation of a UCSC Genome Browser on a local machine (mirror)</a> page for a summary of installation options, including the pros and cons of using a mirror -installation via the GBiC program vs. using GBiB. +installation via the GBiC program vs. using GBiB. GBiC can also be used as a Docker container. See +the <a href='docker.html' title=''>Docker help page</a> for more information. </p> <p> The program works by setting up MySQL (MariaDB), Apache, and Ghostscript, and then copying the Genome Browser CGIs onto the machine under <code>/usr/local/apache/</code>. Because it also deactivates the default Apache htdocs/cgi folders, it is best run on a new machine, or at least a host that is not already used as a web server. The tool can also download full or partial assembly databases, update the Genome Browser CGIs, and remove temporary files (aka “trash cleaning”). </p> <p> The GBiC program has been tested and confirmed to work with Ubuntu 18/20/22/24 LTS, Rocky 9.5, and Fedora 30/35/41. </p>