59fb440ba930a3f0eaee0af6e7fe6a2526b10551 gperez2 Wed Dec 3 11:49:31 2025 -0800 More updates to gnomadMpc.html and releasing/announcing the hg19 gnomAD MPC track, refs #36531 diff --git src/hg/makeDb/trackDb/human/hg19/gnomadMpc.html src/hg/makeDb/trackDb/human/hg19/gnomadMpc.html index 87e28e4dc07..7e5f3fa4688 100644 --- src/hg/makeDb/trackDb/human/hg19/gnomadMpc.html +++ src/hg/makeDb/trackDb/human/hg19/gnomadMpc.html @@ -1,31 +1,31 @@
The ${longLabel} track shows a score that tries to identify missense-depleted regions using the patterns of rare missense variation in 125,748 gnomAD v2.1.1 exomes, compared to a null mutational model. Missense-depleted regions are enriched for ClinVar pathogenic variants, de novo missense variants in individuals with neurodevelopmental disorders (NDDs), and complex trait heritability. The score's publication suggests that regions with less than 20% of their expected missense variation achieve moderate support for pathogenicity according to ACMG criteria.
-Regions of transcripts with constraint predictions are colored using the viridis palette, where -yellow indicates the lowest OE values and dark blue-purple indicates the highest. +Transcript regions with constraint predictions are colored using the viridis palette, where yellow +indicates the lowest OE values and dark blue-purple indicates the highest.
OE Constraint Legend
Yellow = strongest constraint
Purple = weakest constraint
| Color | OE Range |
|---|---|
| @@ -122,29 +122,28 @@ |