77d8e74cbe26eadaf46c1ca3230f4d0bc59977cc
gperez2
  Mon Mar 3 14:18:27 2025 -0800
Adding chromosomes chrM,chrMT trackDb setting and note about MITOMAP data is available for chrM on hg38 and chrMT on hg19, refs #24849

diff --git src/hg/makeDb/trackDb/human/mitoMap.ra src/hg/makeDb/trackDb/human/mitoMap.ra
index 5bd69b35a2d..9b75172d241 100644
--- src/hg/makeDb/trackDb/human/mitoMap.ra
+++ src/hg/makeDb/trackDb/human/mitoMap.ra
@@ -1,36 +1,37 @@
 track mitoMap
 shortLabel MITOMAP
 longLabel MITOMAP: A human mitochondrial genome database
 type bigBed 9 +
 visibility hide
 group phenDis
 noScoreFilter on
 compositeTrack on
 pennantIcon New red ../goldenPath/newsarch.html#XXXXXX "Released February XX, 2025"
 dataVersion /gbdb/$D/bbi/mitoMapVersion.txt
+chromosomes chrM,chrMT
 
 track mitoMapVars
 shortLabel MITOMAP Variants
 longLabel MITOMAP Control and Coding Variants
 priority 1
 parent mitoMap on
 type bigBed 9 + 11
 group phenDis
 bigDataUrl /gbdb/$D/bbi/mitoMapVars.bb
 exonNumbers off
 url https://www.mitomap.org/foswiki/bin/view/MITOMAP/$<_varType>
 urlLabel MITOMAP link
 mouseOverField _mouseOver
 
 track mitoMapDiseaseMuts
 shortLabel MITOMAP Disease Muts
 longLabel MITOMAP Disease Mutations
 priority 2
 parent mitoMap on
 type bigBed 9 + 14
 group phenDis
 bigDataUrl /gbdb/$D/bbi/mitoMapDiseaseMuts.bb
 exonNumbers off
 url https://www.mitomap.org/foswiki/bin/view/MITOMAP/$<_mutsCodingOrRNA>
 urlLabel MITOMAP link
 mouseOverField _mouseOver