66e03f33064b0c5b0b50bee546ca311348451595 hiram Mon Mar 10 12:39:17 2025 -0700 RefSeq update refs #29545 diff --git src/hg/makeDb/doc/asmHubs/master.run.list src/hg/makeDb/doc/asmHubs/master.run.list index 3aed86d0b6d..67dda50dd3a 100644 --- src/hg/makeDb/doc/asmHubs/master.run.list +++ src/hg/makeDb/doc/asmHubs/master.run.list @@ -1676,30 +1676,31 @@ ./runBuild GCA_030463535.1_fSalBra1.hap2 fish Salminus_brasiliensis ./runBuild GCA_030463565.1_bPelCri1.pri birds Pelecanus_crispus ./runBuild GCA_030490855.1_bPoeAtr1.hap2 birds Poecile_atricapillus ./runBuild GCA_030684295.1_sSteTig4.hap2 vertebrate Stegostoma_tigrinum ./runBuild GCA_030684315.1_sSteTig4.hap1 vertebrate Stegostoma_tigrinum ./runBuild GCA_030704935.1_ASM3070493v1 mammals Sus_scrofa ./runBuild GCA_030710495.1_ASM3071049v1 fish Labroides_dimidiatus ./runBuild GCA_030820635.1_KIZ_Lrid_1.0 birds Chroicocephalus_ridibundus ./runBuild GCA_030848825.1_DD_mTadBra1_pri mammals Tadarida_brasiliensis ./runBuild GCA_030867065.1_rAllMis1 vertebrate Alligator_mississippiensis ./runBuild GCA_030867085.1_rLiaOli1.hap2 vertebrate Liasis_olivaceus ./runBuild GCA_030867095.1_rAllMis1 vertebrate Alligator_mississippiensis ./runBuild GCA_030867105.1_rLiaOli1.hap1 vertebrate Liasis_olivaceus ./runBuild GCA_030867145.1_bOpiHoa1.hap1 birds Opisthocomus_hoazin ./runBuild GCA_030867165.1_bOpiHoa1.hap2 birds Opisthocomus_hoazin +./runBuild GCA_030914275.2_ASM3091427v2 birds Gallus_gallus ./runBuild GCA_030936125.1_bGavSte3.hap1 birds Gavia_stellata ./runBuild GCA_030936135.1_bGavSte3.hap2 birds Gavia_stellata ./runBuild GCA_031001685.1_rEryReg1.hap3 vertebrate Erythrolamprus_reginae ./runBuild GCA_031001765.1_BBF_mMolAlv_v1 mammals Molossus_alvarezi ./runBuild GCA_031010295.1_CA611_1.0 mammals Canis_lupus_familiaris ./runBuild GCA_031010635.1_OD_1.0 mammals Canis_lupus_familiaris ./runBuild GCA_031010765.1_BD_1.0 mammals Canis_lupus_familiaris ./runBuild GCA_031021085.1_rEryReg1.hap2 vertebrate Erythrolamprus_reginae ./runBuild GCA_031021105.1_rEryReg1.hap1 vertebrate Erythrolamprus_reginae ./runBuild GCA_031165255.1_Yella_v2 mammals Canis_lupus_familiaris ./runBuild GCA_031190585.1_ASM3119058v1 viral Carnivore_chapparvovirus_1 ./runBuild GCA_031213475.1_uoNerLuet1.0 invertebrate Saccharina_latissima ./runBuild GCA_031468805.1_bMorBas2.hap1 birds Morus_bassanus ./runBuild GCA_031468815.1_bMorBas2.hap2 birds Morus_bassanus ./runBuild GCA_031763025.1_ASM3176302v1 invertebrate Macrocystis_pyrifera @@ -1912,30 +1913,31 @@ ./runBuild GCA_047511655.1_mCasCan1.hap1 mammals Castor_canadensis ./runBuild GCA_047511675.1_mMarFla1.hap1 mammals Marmota_flaviventris ./runBuild GCA_047512175.1_mMarFla1.hap2 mammals Marmota_flaviventris ./runBuild GCA_047715955.1_rBraPum1.hap2 vertebrate Bradypodion_pumilum ./runBuild GCA_047715975.1_rBraPum1.hap1 vertebrate Bradypodion_pumilum ./runBuild GCA_047774235.1_bZonAlb1.hap2 birds Zonotrichia_albicollis ./runBuild GCA_047830755.1_bZonAlb1.hap1 birds Zonotrichia_albicollis ./runBuild GCA_047922975.1_bEudEle1_v1.hap2 birds Eudromia_elegans ./runBuild GCA_047922985.1_bEudEle1_v1.hap1 birds Eudromia_elegans ./runBuild GCA_047948205.1_ASM4794820v1 invertebrate Lycorma_delicatula ./runBuild GCA_047948215.1_ASM4794821v1 invertebrate Lycorma_delicatula ./runBuild GCA_048126635.1_SpiSpi1_v1.hap1 fish Spinachia_spinachia ./runBuild GCA_048126745.1_DamDam1_v1.mat mammals Dama_dama ./runBuild GCA_048127045.1_DamDam1_v1.pat mammals Dama_dama ./runBuild GCA_048127205.1_SpiSpi1_v1.hap2 fish Spinachia_spinachia +./runBuild GCA_048164845.1_mCanLup2.hap2 mammals Canis_lupus_baileyi ./runBuild GCA_048164855.1_mCanLup2.hap1 mammals Canis_lupus_baileyi ./runBuild GCA_900002395.1_PYYM01 invertebrate Plasmodium_yoelii ./runBuild GCA_900006655.3_Susie3 primates Gorilla_gorilla_gorilla ./runBuild GCA_900011295.1_ATCC19606_assembly bacteria Acinetobacter_baumannii ./runBuild GCA_900029915.1_F._proliferatum_NRRL62905_version_1 fungi Fusarium_proliferatum ./runBuild GCA_900036025.1_v1.0 invertebrate Lymnaea_stagnalis ./runBuild GCA_900044135.1_GZPH1RResV1 fungi Fusarium_graminearum ./runBuild GCA_900088365.1_Bl71nemr invertebrate Branchiostoma_lanceolatum ./runBuild GCA_900090025.2_PowCR01 invertebrate Plasmodium_ovale ./runBuild GCA_900090035.2_PocGH01 invertebrate Plasmodium_ovale ./runBuild GCA_900093555.2_GCA_900093555 invertebrate Plasmodium_vivax ./runBuild GCA_900094665.2_CAROLI_EIJ_v1.1 mammals Mus_caroli ./runBuild GCA_900095595.1_PPRFG01 invertebrate Plasmodium_sp._gorilla_clade_G1 ./runBuild GCA_900097025.1_PRG01 invertebrate Plasmodium_reichenowi ./runBuild GCA_900097035.1_PBLACG01 invertebrate Plasmodium_sp._gorilla_clade_G3 @@ -2937,33 +2939,35 @@ ./runBuild GCF_000355655.1_DendPond_male_1.0 invertebrate Dendroctonus_ponderosae ./runBuild GCF_000359585.1_ATCC25755 bacteria Clostridium_tyrobutyricum_DSM_2637__ATCC_25755__JCM_11008 ./runBuild GCF_000359705.1_Setospaeria_trucica_Et28A_v1.0 fungi Exserohilum_turcica_Et28A ./runBuild GCF_000364345.1_Macaca_fascicularis_5.0 primates Macaca_fascicularis ./runBuild GCF_000365145.1_Phia_euro_CBS_101466_V1 fungi Cyphellophora_europaea_CBS_101466 ./runBuild GCF_000365165.1_Clad_carr_CBS_160_54_V1 fungi Cladophialophora_carrionii_CBS_160.54 ./runBuild GCF_000365185.1_Chinese_Lotus_1.1 plants Nelumbo_nucifera ./runBuild GCF_000365465.2_Ptep_2.0 invertebrate Parasteatoda_tepidariorum ./runBuild GCF_000365465.3_Ptep_3.0 invertebrate Parasteatoda_tepidariorum ./runBuild GCF_000371365.1_Musca_domestica-2.0.2 invertebrate Musca_domestica ./runBuild GCF_000372685.2_Astyanax_mexicanus-2.0 fish Astyanax_mexicanus ./runBuild GCF_000375325.1_Caprub1_0 plants Capsella_rubella ./runBuild GCF_000385455.1_Zonotrichia_albicollis-1.0.1 birds Zonotrichia_albicollis ./runBuild GCF_000390285.2_Agla_2.0 invertebrate Anoplophora_glabripennis ./runBuild GCF_000390325.2_Ntom_v01 plants Nicotiana_tomentosiformis +./runBuild GCF_000390325.3_ASM39032v3 plants Nicotiana_tomentosiformis ./runBuild GCF_000392275.1_UCRPA7V03 fungi Phaeoacremonium_minimum_UCRPA7 ./runBuild GCF_000392375.2_ASM39237v2 bacteria Clostridium_tyrobutyricum_DSM_2637__ATCC_25755__JCM_11008 ./runBuild GCF_000393655.1_Nsyl plants Nicotiana_sylvestris +./runBuild GCF_000393655.2_ASM39365v2 plants Nicotiana_sylvestris ./runBuild GCF_000400465.1_Wallemia_ichthyophaga_version_1.0 fungi Wallemia_ichthyophaga_EXF-994 ./runBuild GCF_000403515.1_ASM40351v1 fungi Pseudozyma_hubeiensis_SY62 ./runBuild GCF_000409485.1_GLAREA fungi Glarea_lozoyensis_ATCC_20868 ./runBuild GCF_000409795.2_Chlorocebus_sabeus_1.1 primates Chlorocebus_sabaeus ./runBuild GCF_000412655.1_ASM41265v1 mammals Myotis_brandtii ./runBuild GCF_000413155.1_DPV01 plants Phoenix_dactylifera ./runBuild GCF_000414095.1_ASM41409v2 plants Morus_notabilis ./runBuild GCF_000417875.1_Pflocc_1.0 fungi Anthracocystis_flocculosa_PF-1 ./runBuild GCF_000429805.1_ASM42980v1 bacteria Clostridium_tyrobutyricum_DSM_2637__ATCC_25755__JCM_11008 ./runBuild GCF_000439145.1_ASM43914v3 fungi Rhizophagus_irregularis_DAOM_181602=DAOM_197198 ./runBuild GCF_000442215.1_Lipotes_vexillifer_v1 mammals Lipotes_vexillifer ./runBuild GCF_000442215.2_Lipotes_vexillifer_v1.1 mammals Lipotes_vexillifer ./runBuild GCF_000442705.1_EG5 plants Elaeis_guineensis ./runBuild GCF_000455745.1_ASM45574v1 vertebrate Alligator_sinensis ./runBuild GCF_000457365.1_ASM45736v1 invertebrate Biomphalaria_glabrata @@ -4010,30 +4014,31 @@ ./runBuild GCF_008629635.1_Kwon_shan_CBS_12478_V1 fungi Kwoniella_shandongensis ./runBuild GCF_008629635.2_ASM862963v2 fungi Kwoniella_shandongensis ./runBuild GCF_008632895.1_UCSF_Mcou_1 mammals Mastomys_coucha ./runBuild GCF_008641045.1_PisVer_v2 plants Pistacia_vera ./runBuild GCF_008692025.1_mPhoSin1.pri mammals Phocoena_sinus ./runBuild GCF_008692095.1_UIUC_Espe_1.0 fish Etheostoma_spectabile ./runBuild GCF_008694065.1_Dalch_JS-1345 fungi Daldinia_childiae ./runBuild GCF_008704595.1_ASM870459v1 fungi Diutina_rugosa ./runBuild GCF_008728515.1_Panubis1.0 primates Papio_anubis ./runBuild GCF_008729295.1_YSFRI_Pleo_2.0 fish Plectropomus_leopardus ./runBuild GCF_008777455.1_ASM877745v1 viral Bovine_herpesvirus_type_1.1 ./runBuild GCF_008802855.1_Ppyr1.3 invertebrate Photinus_pyralis ./runBuild GCF_008822105.2_bTaeGut2.pat.W.v2 birds Taeniopygia_guttata ./runBuild GCF_008831285.1_ASM883128v1 plants Nymphaea_colorata ./runBuild GCF_008831285.2_ASM883128v2 plants Nymphaea_colorata +./runBuild GCF_009017415.1_ASM901741v1 fungi Aspergillus_flavus ./runBuild GCF_009078355.1_GENO_Phyp_1.0 fish Pangasianodon_hypophthalmus ./runBuild GCF_009176365.1_Aspalli1 fungi Aspergillus_alliaceus ./runBuild GCF_009176505.1_AAFC_SMos_1.0 invertebrate Sitodiplosis_mosellana ./runBuild GCF_009176525.2_AAFC_CNas_1.1 invertebrate Contarinia_nasturtii ./runBuild GCF_009193385.2_Nvit_psr_1.1 invertebrate Nasonia_vitripennis ./runBuild GCF_009193445.1_Asppset1 fungi Aspergillus_pseudotamarii ./runBuild GCF_009193585.1_Aspcae1 fungi Aspergillus_caelatus ./runBuild GCF_009193645.1_Asppsen1 fungi Aspergillus_pseudonomius ./runBuild GCF_009389715.1_palm_55x_up_171113_PBpolish2nd_filt_p plants Phoenix_dactylifera ./runBuild GCF_009556855.1_ASM955685v1 fungi Talaromyces_marneffei ./runBuild GCF_009602425.1_ASM960242v1 invertebrate Actinia_tenebrosa ./runBuild GCF_009650485.1_drosAlbom15112-1751.03v1 invertebrate Drosophila_albomicans ./runBuild GCF_009650485.2_ASM965048v2 invertebrate Drosophila_albomicans ./runBuild GCF_009650955.1_bCorMon1.pri birds Corvus_moneduloides ./runBuild GCF_009663435.1_Callithrix_jacchus_cj1700_1.1 primates Callithrix_jacchus @@ -4427,54 +4432,56 @@ ./runBuild GCF_019202705.1_ASM1920270v1 fungi [Candida]_subhashii ./runBuild GCF_019202715.1_MaoHua_MHT plants Actinidia_eriantha ./runBuild GCF_019202785.1_ASM1920278v2 invertebrate Penaeus_chinensis ./runBuild GCF_019207285.1_ASM1920728v1 fungi Ogataea_haglerorum ./runBuild GCF_019207475.1_ASM1920747v1 fungi Ogataea_angusta ./runBuild GCF_019232065.1_USGS_Curo_1.0 birds Centrocercus_urophasianus ./runBuild GCF_019238085.1_USGS_WTPT01 birds Lagopus_leucura ./runBuild GCF_019279795.1_PAN1.0 vertebrate Protopterus_annectens ./runBuild GCF_019320065.1_ASM1932006v1 mammals Cervus_canadensis ./runBuild GCF_019320115.1_ASM1932011v1 plants Miscanthus_floridulus ./runBuild GCF_019321695.1_ASM1932169v1 fungi Diaporthe_batatas ./runBuild GCF_019356215.1_ASM1935621v1 bacteria Acinetobacter_baumannii ./runBuild GCF_019359855.1_MPB_Lper_Kyuss_1697 plants Lolium_perenne ./runBuild GCF_019393585.1_ZJU_Lbou_2.1 invertebrate Leptopilina_boulardi ./runBuild GCF_019393635.1_mDroGli1.pri mammals Dromiciops_gliroides +./runBuild GCF_019399895.1_Cobs3.1 invertebrate Cardiocondyla_obscurior ./runBuild GCF_019419815.1_Pyrus_bretschneideri_v1 plants Pyrus_x_bretschneideri ./runBuild GCF_019434415.1_Coph_MacrARSEF324_H1_v1.0 fungi Metarhizium_acridum ./runBuild GCF_019456465.1_ASM1945646v1 fungi Bacidia_gigantensis ./runBuild GCF_019457755.1_ASM1945775v1 invertebrate Venturia_canescens ./runBuild GCF_019578655.1_ASM1957865v1 plants Ricinus_communis ./runBuild GCF_019609905.1_ASM1960990v1 fungi Fusarium_poae ./runBuild GCF_019649055.1_Prichtersi_v1.0 invertebrate Paramacrobiotus_metropolitanus ./runBuild GCF_019650295.1_Ck_assembly01 fungi Cercospora_kikuchii ./runBuild GCF_019669845.1_AcreTS7_1 fungi Emericellopsis_atlantica ./runBuild GCF_019703515.2_UBuf_Myxa_2 fish Myxocyprinus_asiaticus ./runBuild GCF_019740435.1_SWU_Gaff_1.0 fish Gambusia_affinis ./runBuild GCF_019802595.1_ASM1980259v1 fish Syngnathoides_biaculeatus ./runBuild GCF_019915245.1_ASM1991524v1 fungi Fusarium_musae ./runBuild GCF_019923935.1_NDDB_SH_1 mammals Bubalus_bubalis ./runBuild GCF_019924925.1_HZGC01 fish Ctenopharyngodon_idella ./runBuild GCF_019925205.1_ASM1992520v1 invertebrate Metopolophium_dirhodum ./runBuild GCF_019968955.1_MNHN_PgigA_v1 invertebrate Porospora_cf._gigantea_A ./runBuild GCF_019968985.1_MNHN_PgigB_v1.1 invertebrate Porospora_cf._gigantea_B ./runBuild GCF_020080835.1_MPM_Cglom_v2.3 invertebrate Cotesia_glomerata ./runBuild GCF_020085105.1_ASM2008510v1 fish Siniperca_chuatsi ./runBuild GCF_020099395.1_ASM2009939v1 bacteria Streptomyces_mobaraensis ./runBuild GCF_020137385.1_ASM2013738v1 fungi Morchella_sextelata ./runBuild GCF_020171115.1_ASM_NN_V1 mammals Neogale_vison ./runBuild GCF_020184175.1_ASM2018417v2 invertebrate Aphis_gossypii +./runBuild GCF_020186115.1_ASM2018611v1 invertebrate Histomonas_meleagridis ./runBuild GCF_020283565.1_ARS_RC_1.1 plants Trifolium_pratense ./runBuild GCF_020360975.1_ASM2036097v1 fungi Hirsutella_rhossiliensis ./runBuild GCF_020379485.1_Da-Ae plants Brassica_napus ./runBuild GCF_020382885.2_fScaArg1.pri fish Scatophagus_argus ./runBuild GCF_020424385.1_ASM2042438v2 invertebrate Procambarus_clarkii ./runBuild GCF_020466585.1_Dpon_F_20191213v2 invertebrate Dendroctonus_ponderosae ./runBuild GCF_020497125.1_ASM2049712v1 vertebrate Mauremys_mutica ./runBuild GCF_020509005.1_Cfulv_R5_v5 fungi Fulvia_fulva ./runBuild GCF_020520425.1_BTI_SOV_V1 plants Spinacia_oleracea ./runBuild GCF_020536065.1_ASM2053606v1 fungi Ogataea_philodendri ./runBuild GCF_020536995.1_UMN_Dpol_1.0 invertebrate Dreissena_polymorpha ./runBuild GCF_020615455.1_ASM2061545v1 fish Coregonus_clupeaformis ./runBuild GCF_020623625.1_UHD_SCDLUD_16 fungi Saccharomycodes_ludwigii ./runBuild GCF_020631705.1_ASM2063170v1.1 invertebrate Daphnia_magna ./runBuild GCF_020647795.1_ASM2064779v1 fungi Trichoderma_atroviride @@ -4530,106 +4537,112 @@ ./runBuild GCF_021461385.2_iqSchPice1.1 invertebrate Schistocerca_piceifrons ./runBuild GCF_021461395.2_iqSchAmer2.1 invertebrate Schistocerca_americana ./runBuild GCF_021462225.1_DD_fGirMul_XY1 fish Girardinichthys_multiradiatus ./runBuild GCF_021464435.1_ULB_Chis1_1.0 invertebrate Cataglyphis_hispanica ./runBuild GCF_021613505.1_UCLA_HA_Equagga_1.0 mammals Equus_quagga ./runBuild GCF_021653875.1_ASM2165387v1 fungi Nematocida_major ./runBuild GCF_021730395.1_MADL_Memer_1 invertebrate Mercenaria_mercenaria ./runBuild GCF_021821965.1_FI-F-10_v._1 fungi Ordospora_pajunii ./runBuild GCF_021869535.1_xbMytCali1.0.p invertebrate Mytilus_californianus ./runBuild GCF_021869965.1_sRhiTyp1.1 vertebrate Rhincodon_typus ./runBuild GCF_021901455.1_iyNeoLeco1.1 invertebrate Neodiprion_lecontei ./runBuild GCF_021901495.1_iyNeoVirg1.1 invertebrate Neodiprion_virginiana ./runBuild GCF_021901695.1_Pst134E36_v1_pri fungi Puccinia_striiformis_f._sp._tritici ./runBuild GCF_021917145.1_fHypTra1 fish Hypomesus_transpacificus ./runBuild GCF_021976095.1_XeniaSp_v1 invertebrate Xenia_sp._Carnegie-2017 +./runBuild GCF_022045235.1_xgHalCrac1.p invertebrate Haliotis_cracherodii ./runBuild GCF_022045245.1_ASM2204524v1 invertebrate Lucilia_cuprina ./runBuild GCF_022059095.1_T.mel.1 invertebrate Trypanosoma_melophagium ./runBuild GCF_022079265.1_mLynRuf1.p mammals Lynx_rufus ./runBuild GCF_022113875.1_Hydra_105_v3 invertebrate Hydra_vulgaris ./runBuild GCF_022114955.1_ASM2211495v2 fungi Emericellopsis_cladophorae ./runBuild GCF_022201045.2_DVS_A1.0 plants Citrus_sinensis ./runBuild GCF_022264815.1_Fomros1 fungi Rhodofomes_roseus ./runBuild GCF_022316705.1_sSteFas1.1 vertebrate Stegostoma_fasciatum ./runBuild GCF_022343315.1_CAIQ.LM.1 fungi Plenodomus_lingam ./runBuild GCF_022355385.1_MUSNIG.SB6536 mammals Mustela_nigripes ./runBuild GCF_022376445.1_Antser1 fungi Antrodia_serialis ./runBuild GCF_022376455.1_Epityp1 fungi Epithele_typhae ./runBuild GCF_022376915.1_ASM2237691v1 mammals Moschus_berezovskii ./runBuild GCF_022379125.1_ASM2237912v1 fish Scophthalmus_maximus ./runBuild GCF_022458985.1_CIBA_Mcephalus_1.1 fish Mugil_cephalus ./runBuild GCF_022478715.1_Daldec1 fungi Daldinia_decipiens ./runBuild GCF_022478755.1_Dalloc1 fungi Daldinia_loculata ./runBuild GCF_022478825.1_Dalcal1 fungi Daldinia_caldariorum ./runBuild GCF_022495145.1_Xylbam139988_1 fungi Xylaria_bambusicola ./runBuild GCF_022496945.1_Annmae1 fungi Annulohypoxylon_maeteangense ./runBuild GCF_022497035.1_Dalver1 fungi Daldinia_vernicosa ./runBuild GCF_022539315.1_serCan2020 birds Serinus_canaria ./runBuild GCF_022539355.2_HSTE1.2 fish Hippoglossus_stenolepis ./runBuild GCF_022539395.1_myiCay2020 birds Myiozetetes_cayanensis ./runBuild GCF_022539505.1_APGP_CSIRO_Lrig_0.1 plants Lolium_rigidum ./runBuild GCF_022539595.1_ASM2253959v1 fish Amphiprion_ocellaris +./runBuild GCF_022539635.2_CSIRO-AGI_Ctep_v1 invertebrate Chironomus_tepperi ./runBuild GCF_022539665.1_CSIRO_AGI_Dcar_v0.2 invertebrate Daphnia_carinata ./runBuild GCF_022539665.2_CSIRO_AGI_Dcar_HiC_V3 invertebrate Daphnia_carinata ./runBuild GCF_022577435.1_fEmbJac1.0.p fish Embiotoca_jacksoni ./runBuild GCF_022578515.1_Anntru1 fungi Annulohypoxylon_truncatum ./runBuild GCF_022578975.1_Hyptru1 fungi Hypoxylon_trugodes ./runBuild GCF_022581195.2_ilHelZeax1.1 invertebrate Helicoverpa_zea ./runBuild GCF_022605165.1_ASM2260516v1 fungi Purpureocillium_takamizusanense ./runBuild GCF_022605725.1_icAntGran1.3 invertebrate Anthonomus_grandis_grandis ./runBuild GCF_022655615.1_HZAU_PFXX_2.0 fish Tachysurus_fulvidraco ./runBuild GCF_022682495.1_HLdesRot8A mammals Desmodus_rotundus +./runBuild GCF_022682495.2_HLdesRot8A.1 mammals Desmodus_rotundus ./runBuild GCF_022695815.1_EurotioJF033F_1 fungi Exophiala_viscosa ./runBuild GCF_022702325.1_ASM2270232v1 fungi Drepanopeziza_brunnea_f._sp._multigermtubi ./runBuild GCF_022749685.1_fSemPul1.0.p fish Semicossyphus_pulcher ./runBuild GCF_022829205.1_ASM2282920v1 fungi Neoarthrinium_moseri ./runBuild GCF_022830035.1_ASM2283003v1 fungi Ophidiomyces_ophidiicola ./runBuild GCF_022836535.1_Cspa_1.0 fungi Colletotrichum_spaethianum ./runBuild GCF_022837055.1_UM_Priviv_1.0 mammals Prionailurus_viverrinus ./runBuild GCF_022984875.1_Hypfra2 fungi Hypoxylon_fragiforme ./runBuild GCF_022985175.1_IGBB_LRoh.1.0 fish Labeo_rohita ./runBuild GCF_023053635.1_rElgMul1.1.pri vertebrate Elgaria_multicarinata_webbii ./runBuild GCF_023055335.1_fCliAna1.0.p fish Clinocottus_analis +./runBuild GCF_023055355.1_bAgeTri1.0.p birds Agelaius_tricolor ./runBuild GCF_023055435.1_xgHalRufe1.0.p invertebrate Haliotis_rufescens ./runBuild GCF_023065955.1_UrsArc1.0 mammals Ursus_arctos ./runBuild GCF_023065955.2_UrsArc2.0 mammals Ursus_arctos ./runBuild GCF_023078275.1_LegGlyc_1.1 invertebrate Leguminivora_glycinivorella ./runBuild GCF_023091745.1_Takin1.1 mammals Budorcas_taxicolor ./runBuild GCF_023101765.2_AGI-APGP_CSIRO_Sfru_2.0 invertebrate Spodoptera_frugiperda ./runBuild GCF_023119035.1_UniMelb_Shisp_WGS_1.0 plants Salvia_hispanica ./runBuild GCF_023158985.2_OEROSLIN_1.1 invertebrate Ostrea_edulis ./runBuild GCF_023159225.1_ASM2315922v1 mammals Perognathus_longimembris_pacificus ./runBuild GCF_023168085.1_PurlilCBS_1.0 fungi Purpureocillium_lilacinum ./runBuild GCF_023278565.1_ASM2327856v1 fungi Colletotrichum_lupini ./runBuild GCF_023343755.1_ASM2334375v1 fungi Candida_oxycetoniae ./runBuild GCF_023343755.2_ASM2334375v2 fungi Candida_oxycetoniae ./runBuild GCF_023343835.1_bLagMut1_primary birds Lagopus_muta ./runBuild GCF_023349555.1_fCebVio1.0.p fish Cebidichthys_violaceus ./runBuild GCF_023373465.1_Oket_V2 fish Oncorhynchus_keta ./runBuild GCF_023373825.1_ASM2337382v1 invertebrate Bactrocera_dorsalis ./runBuild GCF_023375685.1_Billie_1.0 fish Ictalurus_furcatus ./runBuild GCF_023375885.1_qqDerAnde1.2 invertebrate Dermacentor_andersoni ./runBuild GCF_023375975.1_AstMex3_surface fish Astyanax_mexicanus ./runBuild GCF_023522795.1_NDSU_Fsol_1.0 fungi Fusarium_solani ./runBuild GCF_023558435.1_ASM2355843v2 invertebrate Drosophila_sulfurigaster_albostrigata ./runBuild GCF_023558535.2_ASM2355853v2 invertebrate Drosophila_nasuta ./runBuild GCF_023601865.1_ASM2360186v2 fungi Aspergillus_affinis ./runBuild GCF_023614345.1_UGA_ACOO_1.1 invertebrate Adelges_cooleyi ./runBuild GCF_023634085.1_bFalChe1.pri birds Falco_cherrug ./runBuild GCF_023634155.1_bFalPer1.pri birds Falco_peregrinus ./runBuild GCF_023638135.1_bFalBia1.pri birds Falco_biarmicus ./runBuild GCF_023653815.1_GSC_CCare_1.0 vertebrate Caretta_caretta +./runBuild GCF_023653815.2_GSC_CCare_1.0 vertebrate Caretta_caretta +./runBuild GCF_023699985.2_Ovbor_1.2 mammals Odocoileus_virginianus ./runBuild GCF_023701775.1_HaSCD2 invertebrate Helicoverpa_armigera ./runBuild GCF_023721935.1_Puncia_PCG_1.0 mammals Panthera_uncia ./runBuild GCF_023724105.1_carGib1.2-hapl.c fish Carassius_gibelio ./runBuild GCF_023757985.1_ASM2375798v1 fungi Alternaria_ethzedia ./runBuild GCF_023757995.1_ASM2375799v1 fungi Alternaria_metachromatica ./runBuild GCF_023758015.1_ASM2375801v1 fungi Alternaria_viburni ./runBuild GCF_023758025.1_ASM2375802v1 fungi Alternaria_triticimaculans ./runBuild GCF_023758065.1_ASM2375806v1 fungi Alternaria_ventricosa ./runBuild GCF_023758075.1_ASM2375807v1 fungi Alternaria_novae-zelandiae ./runBuild GCF_023758085.1_ASM2375808v1 fungi Alternaria_hordeiaustralica ./runBuild GCF_023856365.1_BBRACH_0.4 fish Brienomyrus_brachyistius ./runBuild GCF_023864275.1_iqSchCanc2.1 invertebrate Schistocerca_cancellata ./runBuild GCF_023864345.2_iqSchSeri2.2 invertebrate Schistocerca_serialis_cubense ./runBuild GCF_023897955.1_iqSchGreg1.2 invertebrate Schistocerca_gregaria ./runBuild GCF_023898315.1_iqSchNite1.1 invertebrate Schistocerca_nitens @@ -4736,30 +4749,31 @@ ./runBuild GCF_027244095.1_rHemCap1.1.pri vertebrate Hemicordylus_capensis ./runBuild GCF_027358585.1_fPanHyp1.pri fish Pangasianodon_hypophthalmus ./runBuild GCF_027358695.1_aSpeBom1.2.pri vertebrate Spea_bombifrons ./runBuild GCF_027406575.1_mNycCou1.pri primates Nycticebus_coucang ./runBuild GCF_027409185.1_mCynVol1.pri mammals Cynocephalus_volans ./runBuild GCF_027409825.1_fScoJap1.pri fish Scomber_japonicus ./runBuild GCF_027474105.1_Auburn_PproV2 fish Poeciliopsis_prolifica ./runBuild GCF_027475565.1_VMU_Ajub_asm_v1.0 mammals Acinonyx_jubatus ./runBuild GCF_027477595.1_bHaeMex1.pri birds Haemorhous_mexicanus ./runBuild GCF_027563975.1_ilPloInte3.1 invertebrate Plodia_interpunctella ./runBuild GCF_027563975.2_ilPloInte3.2 invertebrate Plodia_interpunctella ./runBuild GCF_027574615.1_DD_ASM_mEF_20220401 mammals Eptesicus_fuscus ./runBuild GCF_027579445.1_bAmmNel1.pri birds Ammospiza_nelsoni ./runBuild GCF_027579695.1_fNeoGra1.pri fish Neoarius_graeffei ./runBuild GCF_027579735.1_aBomBom1.pri vertebrate Bombina_bombina +./runBuild GCF_027580195.1_NWIPB_WYAK_1.1 mammals Bos_mutus ./runBuild GCF_027580225.1_HAU_Mang_1.0 fish Misgurnus_anguillicaudatus ./runBuild GCF_027595985.1_mSorAra2.pri mammals Sorex_araneus ./runBuild GCF_027596085.1_Afim_UVic_2022 fish Anoplopoma_fimbria ./runBuild GCF_027744805.1_RoL_Ddac_1.1 fish Dunckerocampus_dactyliophorus ./runBuild GCF_027744825.2_RoL_Sspl_1.0 fish Synchiropus_splendidus ./runBuild GCF_027789165.1_UI_Nfuz_MZM_1.0 fish Nothobranchius_furzeri ./runBuild GCF_027789765.1_aDenEbr1.pat vertebrate Dendropsophus_ebraccatus ./runBuild GCF_027791375.1_UM_Iind_1.1 birds Indicator_indicator ./runBuild GCF_027887145.1_bAmmCau1.pri birds Ammospiza_caudacuta ./runBuild GCF_027887155.1_rMalTer1.hap1 vertebrate Malaclemys_terrapin_pileata ./runBuild GCF_027887165.1_mMonDom1.pri mammals Monodelphis_domestica ./runBuild GCF_027921745.1_ASM2792174v1 fungi Schizosaccharomyces_osmophilus ./runBuild GCF_027942845.1_ASM2794284v1 fungi Colletotrichum_fiorinia ./runBuild GCF_027943255.1_idAnaObli1_1.0 invertebrate Anastrepha_obliqua ./runBuild GCF_027946475.1_ASM2794647v1 fungi Didymosphaeria_variabile @@ -4767,30 +4781,31 @@ ./runBuild GCF_028017835.1_rEmyOrb1.hap1 vertebrate Emys_orbicularis ./runBuild GCF_028018385.1_mNeoNeb1.pri mammals Neofelis_nebulosa ./runBuild GCF_028018845.1_bMelGeo1.pri birds Melospiza_georgiana ./runBuild GCF_028021215.1_mEscRob2.pri mammals Eschrichtius_robustus ./runBuild GCF_028023285.1_mBalRic1.hap2 mammals Balaenoptera_ricei ./runBuild GCF_028296485.1_nextdenovo-longstitch-racon4-pilon3 invertebrate Oppia_nitens ./runBuild GCF_028389875.1_bPtePen1.pri birds Rhea_pennata ./runBuild GCF_028390025.1_aPseCor3.hap2 vertebrate Pseudophryne_corroboree ./runBuild GCF_028408465.1_idAnaLude1.1 invertebrate Anastrepha_ludens ./runBuild GCF_028476545.1_ASM2847654v2 invertebrate Physella_acuta ./runBuild GCF_028476545.2_ASM2847654v3 invertebrate Physella_acuta ./runBuild GCF_028500815.1_bRisTri1.patW.cur.20221130 birds Rissa_tridactyla ./runBuild GCF_028502605.1_ASM2850260v1 fungi Trichoderma_breve ./runBuild GCF_028533385.1_Panthera_onca_HiC mammals Panthera_onca ./runBuild GCF_028537555.1_ilBatPhil1.0.hap1 invertebrate Battus_philenor +./runBuild GCF_028538775.1_mMyoYum1.0.hap1 mammals Myotis_yumanensis ./runBuild GCF_028551555.1_PUWL_Pcris_2 birds Melozone_crissalis ./runBuild GCF_028554395.1_APGP_CSIRO_Pwel_v1 birds Pezoporus_wallicus ./runBuild GCF_028554725.1_idZeuCucr1.2 invertebrate Zeugodacus_cucurbitae ./runBuild GCF_028564815.1_mEubGla1.1.hap2._XY mammals Eubalaena_glacialis ./runBuild GCF_028583425.1_MPM_Emac_v1.0 vertebrate Eublepharis_macularius ./runBuild GCF_028583685.1_PetGlider_PUasm1.0 mammals Petaurus_breviceps_papuanus ./runBuild GCF_028640845.1_ASM2864084v1 vertebrate Ahaetulla_prasina ./runBuild GCF_028641065.1_Leri_hhj_1 vertebrate Leucoraja_erinacea ./runBuild GCF_028658345.1_Bduncani_v1 invertebrate Babesia_duncani ./runBuild GCF_028750875.1_UCM_ALF_1.0 invertebrate Macrosteles_quadrilineatus ./runBuild GCF_028751815.1_IMPLAD_Smil_shh plants Salvia_miltiorrhiza ./runBuild GCF_028769735.1_RI_Zleu_2.0 birds Zonotrichia_leucophrys_gambelii ./runBuild GCF_028826775.1_ASM2882677v1 fungi Penicillium_argentinense ./runBuild GCF_028826845.1_ASM2882684v1 fungi Penicillium_canariense ./runBuild GCF_028826855.1_ASM2882685v1 fungi Penicillium_coprophilum @@ -4850,30 +4865,31 @@ ./runBuild GCF_028974085.1_ASM2897408v1 fungi Penicillium_chermesinum ./runBuild GCF_028974205.1_ASM2897420v1 fungi Penicillium_antarcticum ./runBuild GCF_029017545.1_ASM2901754v1 plants Prosopis_cineraria ./runBuild GCF_029030835.1_ASM2903083v1 fish Brachyistius_frenatus ./runBuild GCF_029168945.1_ASM2916894v1 plants Cannabis_sativa ./runBuild GCF_029169275.1_AcerK_1.0 invertebrate Apis_cerana ./runBuild GCF_029203305.1_ASM2920330v1 fungi Yamadazyma_tenuis ./runBuild GCF_029207755.1_bChaFas1.0.hap1 birds Chamaea_fasciata ./runBuild GCF_029215605.1_mMirAng1.0.hap1 mammals Mirounga_angustirostris ./runBuild GCF_029220125.1_NWPU_hadal_v1 fish Pseudoliparis_swirei ./runBuild GCF_029227915.1_HSymV2.1 invertebrate Hydractinia_symbiolongicarpus ./runBuild GCF_029281585.1_NHGRI_mGorGor1-v1.1-0.2.freeze_pri primates Gorilla_gorilla_gorilla ./runBuild GCF_029281585.2_NHGRI_mGorGor1-v2.0_pri primates Gorilla_gorilla_gorilla ./runBuild GCF_029289425.1_NHGRI_mPanPan1-v1.1-0.1.freeze_pri primates Pan_paniscus ./runBuild GCF_029289425.2_NHGRI_mPanPan1-v2.0_pri primates Pan_paniscus +./runBuild GCF_029378745.1_NIAB-ARS_B.indTharparkar_mat_pri_1.0 mammals Bos_indicus ./runBuild GCF_029407905.1_PCC_UOA_SB_1v2 mammals Bubalus_carabanensis ./runBuild GCF_029448725.1_ASM2944872v1 fish Salvelinus_fontinalis ./runBuild GCF_029499605.1_aHylSar1.hap1 vertebrate Hyla_sarda ./runBuild GCF_029531705.1_CU_Pguttatus_1 vertebrate Pantherophis_guttatus ./runBuild GCF_029532465.1_Liptet1 fungi Lipomyces_tetrasporus ./runBuild GCF_029542785.1_ASM2954278v1 fungi Malassezia_japonica ./runBuild GCF_029542925.1_ASM2954292v1 fungi Malassezia_vespertilionis ./runBuild GCF_029582105.1_OMel1.0 birds Oenanthe_melanoleuca ./runBuild GCF_029603195.1_ASM2960319v2 invertebrate Condylostylus_longicornis ./runBuild GCF_029633855.1_fHopMal1.hap1 fish Hoplias_malabaricus ./runBuild GCF_029633865.1_fLamInc1.hap2 fish Lampris_incognitus ./runBuild GCF_029784015.1_AGI_CSIRO_Lferr_CH_V1 plants Lycium_ferocissimum ./runBuild GCF_029784135.1_ASM2978413v1 invertebrate Toxorhynchites_rutilus_septentrionalis ./runBuild GCF_029784155.1_ASM2978415v1 invertebrate Uranotaenia_lowii ./runBuild GCF_029784165.1_ASM2978416v1 invertebrate Wyeomyia_smithii @@ -4884,58 +4900,64 @@ ./runBuild GCF_029873635.1_ASM2987363v1 plants Malania_oleifera ./runBuild GCF_029890125.1_OSU_Roscu_1.1 fish Rhinichthys_klamathensis_goyatoka ./runBuild GCF_029931775.1_rEulEur1.hap1 vertebrate Euleptes_europaea ./runBuild GCF_029955315.1_icCylForm1.1 invertebrate Cylas_formicarius ./runBuild GCF_029961685.1_dmAriCali1.0.hap1 plants Aristolochia_californica ./runBuild GCF_029962835.1_MsV1 plants Magnolia_sinica ./runBuild GCF_030014155.1_HZAU_Pvac_v1 fish Tachysurus_vachellii ./runBuild GCF_030014295.1_mLoxAfr1.hap2 mammals Loxodonta_africana ./runBuild GCF_030014385.1_fTriRos1.hap1 fish Trichomycterus_rosablanca ./runBuild GCF_030020395.1_mManPen7.hap1 mammals Manis_pentadactyla ./runBuild GCF_030028045.1_mHipAmp2.hap2 mammals Hippopotamus_amphibius_kiboko ./runBuild GCF_030028575.1_MMel_1.1 birds Malurus_melanocephalus ./runBuild GCF_030035675.1_rRhiFlo1.hap2 vertebrate Rhineura_floridana ./runBuild GCF_030052815.1_ASM3005281v1 plants Hevea_brasiliensis ./runBuild GCF_030144855.1_sHypSab1.hap1 vertebrate Hypanus_sabinus +./runBuild GCF_030179895.1_DkikHiC1v2 invertebrate Drosophila_kikkawai +./runBuild GCF_030179905.1_DbipHiC1v2 invertebrate Drosophila_bipectinata +./runBuild GCF_030179915.1_DtakHiC1v2 invertebrate Drosophila_takahashii ./runBuild GCF_030222135.1_86718_ANA_hifiasm-v0.15.2.pri primates Aotus_nancymaae ./runBuild GCF_030247185.1_Malgen_1.1 invertebrate Malaya_genurostris ./runBuild GCF_030247195.1_ASM3024719v1 invertebrate Topomyia_yanbarensis ./runBuild GCF_030253575.1_ASM3025357v1 plants Rhododendron_vialii ./runBuild GCF_030254825.1_Bangor_MerUng_6.1 mammals Meriones_unguiculatus ./runBuild GCF_030265055.1_RoL_Dexc_1.0 fish Doryrhamphus_excisus ./runBuild GCF_030265065.1_ASM3026506v1 fish Corythoichthys_intestinalis ./runBuild GCF_030269925.1_ASM3026992v2 invertebrate Bombyx_mori ./runBuild GCF_030272615.1_Sugi_1.0 plants Cryptomeria_japonica ./runBuild GCF_030273125.1_C.striata_1.0 fish Centropristis_striata ./runBuild GCF_030347475.1_UMN_CgA_1 fungi Cadophora_gregata ./runBuild GCF_030384665.1_ASM3038466v1 fungi Lodderomyces_elongisporus ./runBuild GCF_030411735.1_Phiatr1 fungi Phialemonium_atrogriseum ./runBuild GCF_030435595.1_Armtab1 fungi Desarmillaria_tabescens ./runBuild GCF_030435755.1_mOchPri1.hap1 mammals Ochotona_princeps ./runBuild GCF_030435805.1_mMusLut2.pri mammals Mustela_lutreola ./runBuild GCF_030445035.1_mDasNov1.hap2 mammals Dasypus_novemcinctus +./runBuild GCF_030445035.2_mDasNov1.1.hap2 mammals Dasypus_novemcinctus +./runBuild GCF_030449975.1_iyPolMexi1.0 invertebrate Polyergus_mexicanus ./runBuild GCF_030490865.1_bPoeAtr1.hap1 birds Poecile_atricapillus ./runBuild GCF_030504385.1_Musca_domestica.polishedcontigs.V.1.1 invertebrate Musca_domestica ./runBuild GCF_030506205.1_PD_contigs_1.0 fish Paramisgurnus_dabryanus ./runBuild GCF_030549165.1_Lasmin1 fungi Lasiosphaeria_miniovina ./runBuild GCF_030566675.1_ASM3056667v1 bacteria Mycobacterium_tuberculosis ./runBuild GCF_030620025.1_CSIRO_AGI_Pver_v1 invertebrate Pocillopora_verrucosa ./runBuild GCF_030625045.1_CSIRO_AGI_Agris_v1 invertebrate Achroia_grisella ./runBuild GCF_030684315.1_sSteTig4.hap1 vertebrate Stegostoma_tigrinum ./runBuild GCF_030686945.1_ASM3068694v2 invertebrate Centruroides_vittatus ./runBuild GCF_030704535.1_ASM3070453v1 plants Vitis_vinifera ./runBuild GCF_030705265.1_ASM3070526v1 invertebrate Helicoverpa_armigera +./runBuild GCF_030788295.1_Dvir_AGI_RSII-ME invertebrate Drosophila_virilis ./runBuild GCF_030864355.1_ASM3086435v1 fungi Cutaneotrichosporon_cavernicola ./runBuild GCF_030867095.1_rAllMis1 vertebrate Alligator_mississippiensis ./runBuild GCF_030867565.1_CCOSS01 fungi Colletotrichum_costaricense ./runBuild GCF_030867605.1_CPAR01 fungi Colletotrichum_paranaense ./runBuild GCF_030867785.1_Colac2 fungi Colletotrichum_acutatum ./runBuild GCF_030869225.1_CABS01 fungi Colletotrichum_abscissum ./runBuild GCF_030869305.1_CTAM01 fungi Colletotrichum_tamarilloi ./runBuild GCF_030913465.1_Colna1 fungi Colletotrichum_navitas ./runBuild GCF_030913485.1_Colgo1 fungi Colletotrichum_godetiae ./runBuild GCF_030913505.1_Colph1 fungi Colletotrichum_phormii ./runBuild GCF_030936135.1_bGavSte3.hap2 birds Gavia_stellata ./runBuild GCF_030987335.1_ASM3098733v1 plants Cornus_florida ./runBuild GCF_031021105.1_rEryReg1.hap1 vertebrate Erythrolamprus_reginae ./runBuild GCF_031143425.1_aPleWal1.hap1.20221129 vertebrate Pleurodeles_waltl ./runBuild GCF_031168955.1_ASM3116895v1 fish Gadus_macrocephalus @@ -5021,121 +5043,142 @@ ./runBuild GCF_036370855.1_bDroNov1.hap1 birds Dromaius_novaehollandiae ./runBuild GCF_036370985.1_Kaz3 fungi Kazachstania_heterogenica ./runBuild GCF_036373705.1_fAmiCal2.hap1 fish Amia_calva ./runBuild GCF_036417295.1_ASM3641729v1 fungi Cryptococcus_decagattii ./runBuild GCF_036417665.1_bPasDom1.hap1 birds Passer_domesticus ./runBuild GCF_036417845.1_bAptMan1.hap1 birds Apteryx_mantelli ./runBuild GCF_036426115.1_ASM3642611v1 fungi Kwoniella_botswanensis ./runBuild GCF_036512215.1_SLM_r2.1 plants Solanum_lycopersicum ./runBuild GCF_036588685.1_PNRI_Mtr1.1.1.hap1 invertebrate Mytilus_trossulus ./runBuild GCF_036630325.1_ASM3663032v1 fungi Vairimorpha_necatrix ./runBuild GCF_036669905.1_ASM3666990v1 invertebrate Acropora_muricata ./runBuild GCF_036669915.1_ASM3666991v2 invertebrate Pocillopora_verrucosa ./runBuild GCF_036669925.1_ASM3666992v2 invertebrate Montipora_capricornis ./runBuild GCF_036669935.1_ASM3666993v2 invertebrate Montipora_foliosa ./runBuild GCF_036711695.1_CSIRO_AGI_Zmor_V1 invertebrate Zophobas_morio +./runBuild GCF_036711975.1_IU_Otau_3.0 invertebrate Onthophagus_taurus ./runBuild GCF_036810415.1_ASM3681041v1 fungi Kwoniella_dendrophila_CBS_6074 ./runBuild GCF_036810445.1_ASM3681044v1 fungi Kwoniella_europaea_PYCC6329 ./runBuild GCF_036850765.1_mSacBil1_pri_phased_curated mammals Saccopteryx_bilineata ./runBuild GCF_036850825.1_Schama1 fungi Scheffersomyces_amazonensis ./runBuild GCF_036850995.1_mSacLep1_pri_phased_curated mammals Saccopteryx_leptura ./runBuild GCF_036872675.1_ASM3687267v1 fungi Lithohypha_guttulata ./runBuild GCF_036884655.1_Cavendish_Baxijiao_AAA plants Musa_acuminata_AAA_Group ./runBuild GCF_036884675.1_Schcoi1 fungi Scheffersomyces_coipomensis ./runBuild GCF_036884685.1_Schxyl1 fungi Scheffersomyces_xylosifermentans ./runBuild GCF_036898095.1_ASM3689809v2 invertebrate Palaemon_carinicauda ./runBuild GCF_036934945.1_UVic_Omas_1.1 fish Oncorhynchus_masou_masou ./runBuild GCF_036971445.1_sNarBan1.hap1 vertebrate Narcine_bancroftii ./runBuild GCF_036971685.1_bPatFas1.hap2 birds Patagioenas_fasciata ./runBuild GCF_037042795.1_BPBGC_Maene_1.0 birds Molothrus_aeneus ./runBuild GCF_037042905.1_Lp3.0 invertebrate Lytechinus_pictus ./runBuild GCF_037043105.1_ilVanTame1_primary_haplotype invertebrate Vanessa_tameamea ./runBuild GCF_037102585.1_ASM3710258v1 fungi Saccharomycopsis_crataegensis ./runBuild GCF_037126465.1_ASM3712646v1 invertebrate Ornithodoros_turicata ./runBuild GCF_037157495.1_bLatDis1.hap1 birds Lathamus_discolor ./runBuild GCF_037176765.1_rAnoSag1.mat vertebrate Anolis_sagrei ./runBuild GCF_037176945.1_fLatCha1.pri vertebrate Latimeria_chalumnae ./runBuild GCF_037179485.1_CSIRO-AGI_Acam_v1.1 invertebrate Ochlerotatus_camptorhynchus +./runBuild GCF_037325665.1_US_GU_Lsax_2.0 invertebrate Littorina_saxatilis ./runBuild GCF_037355615.1_Dsuz_RU_1.0 invertebrate Drosophila_suzukii ./runBuild GCF_037392515.1_JCU_Hal_asi_v2 invertebrate Haliotis_asinina +./runBuild GCF_037783145.1_EquPr2 mammals Equus_przewalskii ./runBuild GCF_037890685.1_HydraT2T_105 invertebrate Hydra_vulgaris ./runBuild GCF_037950935.1_Myxme1 fungi Myxozyma_melibiosi ./runBuild GCF_037993035.1_T2T-MFA8v1.0 primates Macaca_fascicularis ./runBuild GCF_038021145.1_Pcitr2 fungi Phyllosticta_citriasiana ./runBuild GCF_038025025.1_Pcit17464 fungi Phyllosticta_citribraziliensis ./runBuild GCF_038088225.1_pur_monq_1.0 birds Cyrtonyx_montezumae ./runBuild GCF_038355195.1_fOsmMor3.pri fish Osmerus_mordax ./runBuild GCF_038362585.1_ASM3836258v1 fungi Apiospora_marii ./runBuild GCF_038362705.1_ASM3836270v1 fungi Apiospora_aurea ./runBuild GCF_038363865.1_ASM3836386v1 fungi Apiospora_hydei ./runBuild GCF_038363925.1_ASM3836392v1 fungi Apiospora_phragmitis ./runBuild GCF_038363985.1_ASM3836398v1 fungi Apiospora_kogelbergensis ./runBuild GCF_038381095.1_Phycap1 fungi Phyllosticta_capitalensis ./runBuild GCF_038396675.1_HydraT2T_AEP invertebrate Hydra_vulgaris ./runBuild GCF_038497645.1_Lipchi1 fungi Lipomyces_chichibuensis ./runBuild GCF_038497685.1_Lipsuo1 fungi Kockiozyma_suomiensis ./runBuild GCF_038497785.1_Lipsmi1 fungi Limtongia_smithiae ./runBuild GCF_038497795.1_Liparx1 fungi Lipomyces_arxii ./runBuild GCF_038497815.1_Lipoli1 fungi Lipomyces_oligophaga ./runBuild GCF_038497905.1_Lipjap1 fungi Lipomyces_japonicus ./runBuild GCF_038497915.1_Lipodoor1 fungi Lipomyces_doorenjongii ./runBuild GCF_038497935.1_Diptot1 fungi Dipodascopsis_tothii +./runBuild GCF_038502225.1_ASM3850222v1 invertebrate Cherax_quadricarinatus ./runBuild GCF_038994185.1_USDA_Dalb1.pri invertebrate Dermacentor_albipictus +./runBuild GCF_038994185.2_USDA_Dalb.pri_finalv2 invertebrate Dermacentor_albipictus ./runBuild GCF_039105145.1_ASM3910514v1 fungi Kwoniella_newhampshirensis ./runBuild GCF_039654215.1_AGRO-Manis fungi Metarhizium_anisopliae ./runBuild GCF_039877785.1_fChaTrf1.hap1 fish Chaetodon_trifascialis ./runBuild GCF_039881205.1_ESF131.1 invertebrate Euwallacea_similis ./runBuild GCF_039906515.1_mPseCra1.hap1 mammals Pseudorca_crassidens ./runBuild GCF_039999085.1_Rhomi1 fungi Cystobasidium_minutum_MCA_4210 ./runBuild GCF_040054535.1_ASM4005453v1 fish Antennarius_striatus ./runBuild GCF_040115645.1_ASM4011564v1 invertebrate Euwallacea_fornicatus ./runBuild GCF_040182565.1_Taihu_goose_T2T_genome birds Anser_cygnoides ./runBuild GCF_040183065.1_P.americana_PAMFEO1_priV1 invertebrate Periplaneta_americana ./runBuild GCF_040412425.1_ASM4041242v1 invertebrate Macrobrachium_rosenbergii ./runBuild GCF_040414725.1_ASM4041472v1 invertebrate Anabrus_simplex ./runBuild GCF_040581485.1_Lhum_UNIL_v1.0 invertebrate Linepithema_humile ./runBuild GCF_040668555.1_iyBomFlav1_principal invertebrate Bombus_flavifrons ./runBuild GCF_040807025.1_bStrCam1.hap1 birds Struthio_camelus ./runBuild GCF_040869045.1_ASM4086904v1 invertebrate Eurosta_solidaginis ./runBuild GCF_040869285.1_UKY_Mglu_1.0 vertebrate Myxine_glutinosa ./runBuild GCF_040937935.1_aHypRig1.pri vertebrate Hyperolius_riggenbachi ./runBuild GCF_040938575.1_UKY_AmexF1_1 vertebrate Ambystoma_mexicanum ./runBuild GCF_040954835.1_fLepOcu1.hap2 vertebrate Lepisosteus_oculatus ./runBuild GCF_040956055.1_CSIRO-AGI_Bhir_v1 fish Brachionichthys_hirsutus ./runBuild GCF_040958095.1_FALCON_Pclarkii_2.0 invertebrate Procambarus_clarkii ./runBuild GCF_041146345.1_N_Populina_1.0 fungi Neodothiora_populina ./runBuild GCF_041146395.1_OSU_ERuf_1 primates Eulemur_rufifrons +./runBuild GCF_041260155.1_AS_Pfla_20210202 invertebrate Ptychodera_flava ./runBuild GCF_041260175.1_TUD_VanAlb_v1.0 fungi Vanrija_albida ./runBuild GCF_041296235.1_EquAss-T2T_v2 mammals Equus_asinus ./runBuild GCF_041296265.1_TB-T2T mammals Equus_caballus ./runBuild GCF_041296385.1_UR_Acoe_1.0 birds Aphelocoma_coerulescens ./runBuild GCF_041381155.1_Ai_NY invertebrate Argopecten_irradians ./runBuild GCF_041956435.1_Mycthe1 fungi Mycothermus_thermophilus ./runBuild GCF_041956525.1_Rhipu1 fungi Rhizomucor_pusillus ./runBuild GCF_041956535.1_Calth1 fungi Calcarisporiella_thermophila ./runBuild GCF_041956625.1_Talth1 fungi Thermomyces_dupontii ./runBuild GCF_041956635.1_Thela1 fungi Thermomyces_lanuginosus ./runBuild GCF_041956645.1_Rasby1 fungi Rasamsonia_byssochlamydoides ./runBuild GCF_041956765.1_Thecr1 fungi Thermoascus_crustaceus ./runBuild GCF_042100115.1_ASM4210011v1 fungi Alternaria_dauci ./runBuild GCF_042242105.1_fPemKlu1.hap1 fish Pempheris_klunzingeri +./runBuild GCF_042242935.1_idBacOlea1 invertebrate Bactrocera_oleae ./runBuild GCF_042370625.1_Mychet1 fungi Thermothelomyces_heterothallicus_CBS_202.75 +./runBuild GCF_042370955.1_Acral2 fungi Sodiomyces_alcalophilus_JCM_7366 +./runBuild GCF_042453785.1_GDT2T_hap1 plants Malus_domestica ./runBuild GCF_042477335.1_ARS-UI_OviCan_v1 mammals Ovis_canadensis +./runBuild GCF_042477335.2_ARS-UI_OviCan_v2 mammals Ovis_canadensis +./runBuild GCF_042764415.1_Remth1 fungi Remersonia_thermophila ./runBuild GCF_043159975.1_mMacNem.hap1 primates Macaca_nemestrina +./runBuild GCF_043229965.1_CBGP_Dsuzu_IsoJpt1.0 invertebrate Drosophila_suzukii ./runBuild GCF_043380555.1_NfurGRZ-RIMD1 fish Nothobranchius_furzeri +./runBuild GCF_043381705.1_CAS_Ptep_4.0 invertebrate Parasteatoda_tepidariorum ./runBuild GCF_043641665.1_fEnoArm2.hap1 fish Enoplosus_armatus +./runBuild GCF_044049435.1_Asppdef1 fungi Aspergillus_pseudodeflectus +./runBuild GCF_044049455.1_Aspluc1 fungi Aspergillus_lucknowensis +./runBuild GCF_044167205.1_ASM4416720v1 fungi Ceratocystis_lukuohia ./runBuild GCF_044704955.1_sPriJap1.hap1 vertebrate Pristiophorus_japonicus +./runBuild GCF_045282275.1_CBM3 fungi Nakaseomyces_bracarensis +./runBuild GCF_045679555.1_SLU_Salpinus.1 fish Salvelinus_alpinus +./runBuild GCF_045791955.1_UVic_Ocla_1.0 fish Oncorhynchus_clarkii_lewisi +./runBuild GCF_045866475.1_ASM4586647v1 fungi Madurella_fahalii +./runBuild GCF_046630095.1_CSIRO_AGI_Tana_v1 fish Trachinotus_anak ./runBuild GCF_900000015.1_Plasmopara_halstedii_genome invertebrate Plasmopara_halstedii ./runBuild GCF_900002335.3_GCA_900002335 invertebrate Plasmodium_chabaudi_chabaudi ./runBuild GCF_900002375.2_GCA_900002375 invertebrate Plasmodium_berghei_ANKA ./runBuild GCF_900002385.2_GCA_900002385 invertebrate Plasmodium_yoelii ./runBuild GCF_900005765.1_PRELSG invertebrate Plasmodium_relictum ./runBuild GCF_900005855.1_PGAL8A invertebrate Plasmodium_gallinaceum ./runBuild GCF_900007245.1_AQF_AC_PRJEB9495_v1 fungi Priceomyces_carsonii ./runBuild GCF_900007375.1_ASM90000737v1 fungi Fusarium_venenatum ./runBuild GCF_900044065.1_Genome_assembly_version_1 fungi Fusarium_mangiferae ./runBuild GCF_900067095.1_F._proliferatum_ET1_version_1 fungi Fusarium_proliferatum_ET1 ./runBuild GCF_900067755.1_pvi1.1 vertebrate Pogona_vitticeps ./runBuild GCF_900074925.1_version_1 fungi Ramularia_collo-cygni ./runBuild GCF_900079805.1_Fusarium_fujikuroi_IMI58289_V2 fungi Fusarium_fujikuroi_IMI_58289 ./runBuild GCF_900080235.1_BallGen_V1 fish Labrus_bergylta ./runBuild GCF_900090045.1_PmUG01 bacteria Plasmodium_malariae @@ -5200,30 +5243,31 @@ ./runBuild GCF_902500255.1_fThaAma1.1 fish Thalassophryne_amazonica ./runBuild GCF_902500615.1_NSP_V7 fish Pungitius_pungitius ./runBuild GCF_902635505.1_mSarHar1.11 mammals Sarcophilus_harrisii ./runBuild GCF_902652985.1_xPecMax1.1 invertebrate Pecten_maximus ./runBuild GCF_902655055.1_mLutLut1.2 mammals Lutra_lutra ./runBuild GCF_902686445.1_mSciCar1.2 mammals Neosciurus_carolinensis ./runBuild GCF_902713425.1_fAciRut3.2_maternal_haplotype fish Acipenser_ruthenus ./runBuild GCF_902713615.1_sScyCan1.1 vertebrate Scyliorhinus_canicula ./runBuild GCF_902728285.1_Clytia_hemisphaerica_genome_assembly invertebrate Clytia_hemisphaerica ./runBuild GCF_902729225.1_Ma_sr-lr_union100 mammals Pteropus_giganteus ./runBuild GCF_902806645.1_cgigas_uk_roslin_v1 invertebrate Crassostrea_gigas ./runBuild GCF_902806685.1_iAphHyp1.1 invertebrate Maniola_hyperantus ./runBuild GCF_902806685.2_iAphHyp1.2 invertebrate Maniola_hyperantus ./runBuild GCF_902806735.1_Bank_vole1_10x mammals Myodes_glareolus ./runBuild GCF_902827115.1_fPseGeo1.1 fish Pseudochaenichthys_georgianus +./runBuild GCF_902827115.2_fPseGeo1.2 fish Pseudochaenichthys_georgianus ./runBuild GCF_902827165.1_fTreBer1.1 fish Trematomus_bernacchii ./runBuild GCF_902827175.1_fGymAcu1.1 fish Gymnodraco_acuticeps ./runBuild GCF_903064755.1_KABA2 fungi Kazachstania_barnettii ./runBuild GCF_903798145.1_fDanAes4.1 fish Danio_aesculapii ./runBuild GCF_903992535.1_mArvAmp1.1 mammals Arvicola_amphibius ./runBuild GCF_903992535.2_mArvAmp1.2 mammals Arvicola_amphibius ./runBuild GCF_903995425.1_mOncTor1.1 mammals Onychomys_torridus ./runBuild GCF_903995435.1_mAcoRus1.1 mammals Acomys_russatus ./runBuild GCF_904425465.1_Colossoma_macropomum fish Colossoma_macropomum ./runBuild GCF_904848185.1_fAcaLat1.1 fish Acanthopagrus_latus ./runBuild GCF_904849725.1_MorexV3_pseudomolecules_assembly plants Hordeum_vulgare_subsp._vulgare ./runBuild GCF_905115235.1_iHerIll2.2.curated.20191125 invertebrate Hermetia_illucens ./runBuild GCF_905116875.1_Haplomerged_assembly invertebrate Plutella_xylostella ./runBuild GCF_905146905.1_NYPRO_anot_genome mammals Nyctereutes_procyonoides ./runBuild GCF_905147045.1_ilAglIoxx1.1 invertebrate Nymphalis_io @@ -5330,30 +5374,31 @@ ./runBuild GCF_963259705.1_mMyoDau2.1 mammals Myotis_daubentonii ./runBuild GCF_963422355.1_ooCorCand1.1 invertebrate Corticium_candelabrum ./runBuild GCF_963455315.1_mGloMel1.1 mammals Globicephala_melas ./runBuild GCF_963455315.2_mGloMel1.2 mammals Globicephala_melas ./runBuild GCF_963506605.1_rZooViv1.1 vertebrate Zootoca_vivipara ./runBuild GCF_963514075.1_fConCon1.1 fish Conger_conger ./runBuild GCF_963525475.1_MtbRf bacteria Mycobacterium_tuberculosis ./runBuild GCF_963556715.1_ilCydFagi1.1 invertebrate Cydia_fagiglandana ./runBuild GCF_963576545.1_fLimLim1.1 fish Limanda_limanda ./runBuild GCF_963576615.1_tzWatSuba1.1 invertebrate Watersipora_subatra ./runBuild GCF_963576675.1_ddEupLath1.1 plants Euphorbia_lathyris ./runBuild GCF_963583255.1_drPyrComm1.1 plants Pyrus_communis ./runBuild GCF_963584025.1_fLabMix1.1 fish Labrus_mixtus ./runBuild GCF_963662255.1_bCinCin1.1 birds Cinclus_cinclus ./runBuild GCF_963675165.1_odHalPani1.1 invertebrate Halichondria_panicea +./runBuild GCF_963676685.1_xbMytEdul2.2 invertebrate Mytilus_edulis ./runBuild GCF_963678635.1_txSymRosc1.1 invertebrate Symsagittifera_roscoffensis ./runBuild GCF_963678975.1_odDysAvar1.4 invertebrate Dysidea_avara ./runBuild GCF_963691925.1_fScoSco1.1 fish Scomber_scombrus ./runBuild GCF_963692335.1_fOsmEpe2.1 fish Osmerus_eperlanus ./runBuild GCF_963853765.1_xbMagGiga1.1 invertebrate Magallana_gigas ./runBuild GCF_963854185.1_fSarPil1.1 fish Sardina_pilchardus ./runBuild GCF_963855985.1_ilOstNubi1.1 invertebrate Ostrinia_nubilalis ./runBuild GCF_963921235.1_sMobHyp1.1 vertebrate Mobula_hypostoma ./runBuild GCF_963921805.1_bPhaCar2.1 birds Phalacrocorax_carbo ./runBuild GCF_963924245.1_bChrRid1.1 birds Chroicocephalus_ridibundus ./runBuild GCF_963924675.1_mPhoPho1.1 mammals Phocoena_phocoena ./runBuild GCF_963924715.1_fThuThy2.1 fish Thunnus_thynnus ./runBuild GCF_963930625.1_mMunRee1.1 mammals Muntiacus_reevesi ./runBuild GCF_963930695.1_fLabBer1.1 fish Labrus_bergylta ./runBuild GCF_963932015.1_bAnaAcu1.1 birds Anas_acuta