1121c0e9366df52d3b1aceca534e147060e8af1b hiram Fri May 30 21:29:46 2025 -0700 initial version of VGP Lift Over track refs #34370 diff --git src/hg/makeDb/trackDb/human/hg38/vgpLiftOver.ra src/hg/makeDb/trackDb/human/hg38/vgpLiftOver.ra index 4abf3fe5070..3bfb4b90147 100644 --- src/hg/makeDb/trackDb/human/hg38/vgpLiftOver.ra +++ src/hg/makeDb/trackDb/human/hg38/vgpLiftOver.ra @@ -1,654 +1,589 @@ track vgpLiftOver compositeTrack on shortLabel VGP liftOver longLabel LiftOver chain alignments for VGP assemblies from the Hiller Lab -subGroup1 query Query s001=GCA_048565385.1 s002=GCA_031878705.1 s003=GCA_964656455.1 s004=GCA_041834305.1 s005=GCA_965194825.1 s006=GCA_963455335.1 s007=GCA_036417435.1 s008=GCA_964374135.1 s009=GCA_964194105.1 s010=GCF_011762595.1 s011=GCA_964341445.1 s012=GCA_040955705.1 s013=GCA_964270905.1 s014=GCA_045843805.1 s015=GCA_951394435.1 s016=GCA_964662115.1 s017=GCA_964165515.1 s018=GCA_949752795.1 s019=GCA_047511655.1 s020=GCA_043880545.1 s021=GCA_028451465.1 s022=GCA_043728065.1 s023=GCA_031876335.1 s024=GCA_043727835.1 s025=GCA_964194185.1 s026=GCA_043880425.1 s027=GCA_043748575.1 s028=GCA_023851605.1 s029=GCA_043728145.1 s030=GCA_030035585.1 s031=GCA_043880285.1 s032=GCA_026018925.1 s033=GCA_041735815.1 s034=GCA_030848825.1 s035=GCA_037157525.1 s036=GCA_039880945.1 s037=GCA_043748645.1 s038=GCA_039655065.1 s039=GCA_043880595.1 s040=GCA_038363095.2 s041=GCA_038363145.1 s042=GCA_963383645.1 s043=GCA_037038545.1 s044=GCA_048771875.1 s045=GCA_028571685.1 s046=GCA_964194135.1 s047=GCA_964094495.2 s048=GCA_951640355.1 s049=GCA_963455305.1 s050=GCA_026230055.1 s051=GCA_965115925.1 s052=GCA_964212035.2 s053=GCA_027563665.1 s054=GCA_026229955.1 s055=GCA_949987585.1 s056=GCA_964339955.1 s057=GCA_963924515.1 s058=GCA_903992545.1 s059=GCA_011762505.3 s060=GCA_964271855.1 s061=GCA_037038515.1 s062=GCA_963924665.1 s063=GCA_031878675.1 s064=GCA_043290085.1 visibility hide group compGeno noInherit on color 0,0,0 altColor 255,255,0 type bed 3 configurable on html vgpLiftOver track chainLiftOverGCA_048565385.1 parent vgpLiftOver - subGroups query=s001 priority 26.558 shortLabel Bolivian squirrel monkey - longLabel LiftOver chain Bolivian squirrel monkey (mSaiBol1 primary hap 2025) (GCA_048565385.1_mSaiBol1.pri 2025-03-12) + longLabel Bolivian squirrel monkey (mSaiBol1 primary hap 2025) (% 73.44 coverage) (GCA_048565385.1_mSaiBol1.pri 2025-03-12) type bigChain GCA_048565385.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_048565385.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_048565385.1Link.bb track chainLiftOverGCA_031878705.1 parent vgpLiftOver - subGroups query=s002 priority 43.805 shortLabel Asiatic tapir - longLabel LiftOver chain Asiatic tapir (hap2 2023) (GCA_031878705.1_mTapInd1.hap2 2023-09-25) + longLabel Asiatic tapir (hap2 2023) (% 56.20 coverage) (GCA_031878705.1_mTapInd1.hap2 2023-09-25) type bigChain GCA_031878705.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_031878705.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_031878705.1Link.bb track chainLiftOverGCA_964656455.1 parent vgpLiftOver - subGroups query=s003 priority 48.022 shortLabel gray seal - longLabel LiftOver chain gray seal (hap1.1 2025) (GCA_964656455.1_mHalGry1.hap1.1 2025-01-02) + longLabel gray seal (hap1.1 2025) (% 51.98 coverage) (GCA_964656455.1_mHalGry1.hap1.1 2025-01-02) type bigChain GCA_964656455.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964656455.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964656455.1Link.bb track chainLiftOverGCA_041834305.1 parent vgpLiftOver - subGroups query=s004 priority 48.341 shortLabel humpback whale - longLabel LiftOver chain humpback whale (KW2013002 2024) (GCA_041834305.1_ASM4183430v1 2024-09-09) + longLabel humpback whale (KW2013002 2024) (% 51.66 coverage) (GCA_041834305.1_ASM4183430v1 2024-09-09) type bigChain GCA_041834305.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_041834305.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_041834305.1Link.bb track chainLiftOverGCA_965194825.1 parent vgpLiftOver - subGroups query=s005 priority 48.348 shortLabel fin whale - longLabel LiftOver chain fin whale (hap1.1 2025) (GCA_965194825.1_mBalPhy2.hap1.1 2025-03-10) + longLabel fin whale (hap1.1 2025) (% 51.65 coverage) (GCA_965194825.1_mBalPhy2.hap1.1 2025-03-10) type bigChain GCA_965194825.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_965194825.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_965194825.1Link.bb track chainLiftOverGCA_963455335.1 parent vgpLiftOver - subGroups query=s006 priority 48.748 shortLabel European pine marten - longLabel LiftOver chain European pine marten (primary hap 2023) (GCA_963455335.1_mMarMar1.1 2023-09-20) + longLabel European pine marten (primary hap 2023) (% 51.25 coverage) (GCA_963455335.1_mMarMar1.1 2023-09-20) type bigChain GCA_963455335.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_963455335.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_963455335.1Link.bb track chainLiftOverGCA_036417435.1 parent vgpLiftOver - subGroups query=s007 priority 49.153 shortLabel boutu - longLabel LiftOver chain boutu (hap1 2024) (GCA_036417435.1_mIniGeo1.hap1 2024-02-06) + longLabel boutu (hap1 2024) (% 50.85 coverage) (GCA_036417435.1_mIniGeo1.hap1 2024-02-06) type bigChain GCA_036417435.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_036417435.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_036417435.1Link.bb track chainLiftOverGCA_964374135.1 parent vgpLiftOver - subGroups query=s008 priority 49.301 shortLabel Risso's dolphin - longLabel LiftOver chain Risso's dolphin (hap1.1 2024) (GCA_964374135.1_mGraGri1.hap1.1 2024-11-29) + longLabel Risso's dolphin (hap1.1 2024) (% 50.70 coverage) (GCA_964374135.1_mGraGri1.hap1.1 2024-11-29) type bigChain GCA_964374135.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964374135.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964374135.1Link.bb track chainLiftOverGCA_964194105.1 parent vgpLiftOver - subGroups query=s009 priority 49.421 shortLabel European suslik - longLabel LiftOver chain European suslik (primary hap 2024) (GCA_964194105.1_mSpeCit3.1 2024-06-28) + longLabel European suslik (primary hap 2024) (% 50.58 coverage) (GCA_964194105.1_mSpeCit3.1 2024-06-28) type bigChain GCA_964194105.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964194105.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964194105.1Link.bb track chainLiftOverGCF_011762595.1 parent vgpLiftOver - subGroups query=s010 priority 49.509 shortLabel common bottlenose dolphin - longLabel LiftOver chain common bottlenose dolphin (maternal Y refseq 2020) (GCF_011762595.1_mTurTru1.mat.Y 2020-03-27) + longLabel common bottlenose dolphin (maternal Y refseq 2020) (% 50.49 coverage) (GCF_011762595.1_mTurTru1.mat.Y 2020-03-27) type bigChain GCF_011762595.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCF_011762595.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCF_011762595.1Link.bb track chainLiftOverGCA_964341445.1 parent vgpLiftOver - subGroups query=s011 priority 49.579 shortLabel True's beaked whale - longLabel LiftOver chain True's beaked whale (hap1.1 2024) (GCA_964341445.1_mMesMir1.hap1.1 2024-11-28) + longLabel True's beaked whale (hap1.1 2024) (% 50.42 coverage) (GCA_964341445.1_mMesMir1.hap1.1 2024-11-28) type bigChain GCA_964341445.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964341445.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964341445.1Link.bb track chainLiftOverGCA_040955705.1 parent vgpLiftOver - subGroups query=s012 priority 49.587 shortLabel African hunting dog - longLabel LiftOver chain African hunting dog (LycPic1hap2 2024) (GCA_040955705.1_LycPic1.final.hap2 2024-08-01) + longLabel African hunting dog (LycPic1hap2 2024) (% 50.41 coverage) (GCA_040955705.1_LycPic1.final.hap2 2024-08-01) type bigChain GCA_040955705.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_040955705.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_040955705.1Link.bb track chainLiftOverGCA_964270905.1 parent vgpLiftOver - subGroups query=s013 priority 49.599 shortLabel Atlantic white-sided dolphin - longLabel LiftOver chain Atlantic white-sided dolphin (mLagAcu1.hap1.1 2024) (GCA_964270905.1_mLagAcu1.hap1.1 2024-09-29) + longLabel Atlantic white-sided dolphin (mLagAcu1.hap1.1 2024) (% 50.40 coverage) (GCA_964270905.1_mLagAcu1.hap1.1 2024-09-29) type bigChain GCA_964270905.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964270905.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964270905.1Link.bb track chainLiftOverGCA_045843805.1 parent vgpLiftOver - subGroups query=s014 priority 49.738 shortLabel Arctic ground squirrel - longLabel LiftOver chain Arctic ground squirrel (hap1 2024) (GCA_045843805.1_mUroPar1.hap1 2024-12-13) + longLabel Arctic ground squirrel (hap1 2024) (% 50.26 coverage) (GCA_045843805.1_mUroPar1.hap1 2024-12-13) type bigChain GCA_045843805.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_045843805.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_045843805.1Link.bb track chainLiftOverGCA_951394435.1 parent vgpLiftOver - subGroups query=s015 priority 49.788 shortLabel striped dolphin - longLabel LiftOver chain striped dolphin (primary hap 2023) (GCA_951394435.1_mSteCoe1.1 2023-06-16) + longLabel striped dolphin (primary hap 2023) (% 50.21 coverage) (GCA_951394435.1_mSteCoe1.1 2023-06-16) type bigChain GCA_951394435.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_951394435.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_951394435.1Link.bb track chainLiftOverGCA_964662115.1 parent vgpLiftOver - subGroups query=s016 priority 49.845 shortLabel least weasel - longLabel LiftOver chain least weasel (hap1.1 2025) (GCA_964662115.1_mMusNiv2.hap1.1 2025-01-03) + longLabel least weasel (hap1.1 2025) (% 50.16 coverage) (GCA_964662115.1_mMusNiv2.hap1.1 2025-01-03) type bigChain GCA_964662115.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964662115.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964662115.1Link.bb track chainLiftOverGCA_964165515.1 parent vgpLiftOver - subGroups query=s017 priority 49.899 shortLabel Sowerby's beaked whale - longLabel LiftOver chain Sowerby's beaked whale (hap1 2024) (GCA_964165515.1_mMesBid2.hap1.1 2024-06-06) + longLabel Sowerby's beaked whale (hap1 2024) (% 50.10 coverage) (GCA_964165515.1_mMesBid2.hap1.1 2024-06-06) type bigChain GCA_964165515.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964165515.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964165515.1Link.bb track chainLiftOverGCA_949752795.1 parent vgpLiftOver - subGroups query=s018 priority 49.918 shortLabel northern bottlenose whale - longLabel LiftOver chain northern bottlenose whale (primary hap 2023) (GCA_949752795.1_mHypAmp2.1 2023-04-08) + longLabel northern bottlenose whale (primary hap 2023) (% 50.08 coverage) (GCA_949752795.1_mHypAmp2.1 2023-04-08) type bigChain GCA_949752795.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_949752795.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_949752795.1Link.bb track chainLiftOverGCA_047511655.1 parent vgpLiftOver - subGroups query=s019 priority 50.14 shortLabel American beaver - longLabel LiftOver chain American beaver (hap1 2025) (GCA_047511655.1_mCasCan1.hap1 2025-02-10) + longLabel American beaver (hap1 2025) (% 49.86 coverage) (GCA_047511655.1_mCasCan1.hap1 2025-02-10) type bigChain GCA_047511655.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_047511655.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_047511655.1Link.bb track chainLiftOverGCA_043880545.1 parent vgpLiftOver - subGroups query=s020 priority 50.41 shortLabel greater mouse-tailed bat - longLabel LiftOver chain greater mouse-tailed bat (20210906_DDa primary hap 2024) (GCA_043880545.1_ASM4388054v1 2024-10-28) + longLabel greater mouse-tailed bat (20210906_DDa primary hap 2024) (% 49.59 coverage) (GCA_043880545.1_ASM4388054v1 2024-10-28) type bigChain GCA_043880545.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_043880545.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_043880545.1Link.bb track chainLiftOverGCA_028451465.1 parent vgpLiftOver - subGroups query=s021 priority 51.226 shortLabel North American porcupine - longLabel LiftOver chain North American porcupine (mEreDor1 primary hap 2023) (GCA_028451465.1_mEreDor1.pri 2023-02-06) + longLabel North American porcupine (mEreDor1 primary hap 2023) (% 48.77 coverage) (GCA_028451465.1_mEreDor1.pri 2023-02-06) type bigChain GCA_028451465.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_028451465.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_028451465.1Link.bb track chainLiftOverGCA_043728065.1 parent vgpLiftOver - subGroups query=s022 priority 51.348 shortLabel intermediate horseshoe bat - longLabel LiftOver chain intermediate horseshoe bat (China 20211001_DDa primary hap 2024) (GCA_043728065.1_ASM4372806v1 2024-10-24) + longLabel intermediate horseshoe bat (China 20211001_DDa primary hap 2024) (% 48.65 coverage) (GCA_043728065.1_ASM4372806v1 2024-10-24) type bigChain GCA_043728065.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_043728065.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_043728065.1Link.bb track chainLiftOverGCA_031876335.1 parent vgpLiftOver - subGroups query=s023 priority 51.542 shortLabel intermediate roundleaf bat - longLabel LiftOver chain intermediate roundleaf bat (primary hap 2023) (GCA_031876335.1_mHipLar1.pri 2023-09-25) + longLabel intermediate roundleaf bat (primary hap 2023) (% 48.46 coverage) (GCA_031876335.1_mHipLar1.pri 2023-09-25) type bigChain GCA_031876335.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_031876335.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_031876335.1Link.bb track chainLiftOverGCA_043727835.1 parent vgpLiftOver - subGroups query=s024 priority 51.977 shortLabel Stoliczka's trident bat - longLabel LiftOver chain Stoliczka's trident bat (China 2021113_DDA primary hap 2024) (GCA_043727835.1_ASM4372783v1 2024-10-24) + longLabel Stoliczka's trident bat (China 2021113_DDA primary hap 2024) (% 48.02 coverage) (GCA_043727835.1_ASM4372783v1 2024-10-24) type bigChain GCA_043727835.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_043727835.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_043727835.1Link.bb track chainLiftOverGCA_964194185.1 parent vgpLiftOver - subGroups query=s025 priority 52.1 shortLabel lesser horseshoe bat - longLabel LiftOver chain lesser horseshoe bat (hap1 2024) (GCA_964194185.1_mRhiHip2.hap1.1 2024-06-28) + longLabel lesser horseshoe bat (hap1 2024) (% 47.90 coverage) (GCA_964194185.1_mRhiHip2.hap1.1 2024-06-28) type bigChain GCA_964194185.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964194185.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964194185.1Link.bb track chainLiftOverGCA_043880425.1 parent vgpLiftOver - subGroups query=s026 priority 52.492 shortLabel Yong Hoi Sen's woolly horseshoe bat - longLabel LiftOver chain Yong Hoi Sen's woolly horseshoe bat (Malaysia 20210929_DDd primary hap 2024) (GCA_043880425.1_ASM4388042v1 2024-10-28) + longLabel Yong Hoi Sen's woolly horseshoe bat (Malaysia 20210929_DDd primary hap 2024) (% 47.51 coverage) (GCA_043880425.1_ASM4388042v1 2024-10-28) type bigChain GCA_043880425.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_043880425.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_043880425.1Link.bb track chainLiftOverGCA_043748575.1 parent vgpLiftOver - subGroups query=s027 priority 52.532 shortLabel northern woolly horseshoe bat - longLabel LiftOver chain northern woolly horseshoe bat (20210929_DDc primary hap 2024) (GCA_043748575.1_ASM4374857v1 2024-10-24) + longLabel northern woolly horseshoe bat (20210929_DDc primary hap 2024) (% 47.47 coverage) (GCA_043748575.1_ASM4374857v1 2024-10-24) type bigChain GCA_043748575.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_043748575.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_043748575.1Link.bb track chainLiftOverGCA_023851605.1 parent vgpLiftOver - subGroups query=s028 priority 52.547 shortLabel southern tamandua - longLabel LiftOver chain southern tamandua (mTamTet1 primary hap 2022) (GCA_023851605.1_mTamTet1.pri 2022-06-22) + longLabel southern tamandua (mTamTet1 primary hap 2022) (% 47.45 coverage) (GCA_023851605.1_mTamTet1.pri 2022-06-22) type bigChain GCA_023851605.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_023851605.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_023851605.1Link.bb track chainLiftOverGCA_043728145.1 parent vgpLiftOver - subGroups query=s029 priority 52.682 shortLabel trefoil horseshoe bat - longLabel LiftOver chain trefoil horseshoe bat (Malaysia primary hap 2024) (GCA_043728145.1_ASM4372814v1 2024-10-24) + longLabel trefoil horseshoe bat (Malaysia primary hap 2024) (% 47.32 coverage) (GCA_043728145.1_ASM4372814v1 2024-10-24) type bigChain GCA_043728145.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_043728145.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_043728145.1Link.bb track chainLiftOverGCA_030035585.1 parent vgpLiftOver - subGroups query=s030 priority 52.75 shortLabel dugong - longLabel LiftOver chain dugong (hap1 mDugDug1 2023) (GCA_030035585.1_mDugDug1.hap1 2023-05-18) + longLabel dugong (hap1 mDugDug1 2023) (% 47.25 coverage) (GCA_030035585.1_mDugDug1.hap1 2023-05-18) type bigChain GCA_030035585.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_030035585.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_030035585.1Link.bb track chainLiftOverGCA_043880285.1 parent vgpLiftOver - subGroups query=s031 priority 52.803 shortLabel cyclops roundleaf bat - longLabel LiftOver chain cyclops roundleaf bat (Cote d'Ivoire 20210929_DDa primary hap 2024) (GCA_043880285.1_ASM4388028v1 2024-10-28) + longLabel cyclops roundleaf bat (Cote d'Ivoire 20210929_DDa primary hap 2024) (% 47.20 coverage) (GCA_043880285.1_ASM4388028v1 2024-10-28) type bigChain GCA_043880285.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_043880285.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_043880285.1Link.bb track chainLiftOverGCA_026018925.1 parent vgpLiftOver - subGroups query=s032 priority 53.231 shortLabel large tree shrew - longLabel LiftOver chain large tree shrew (BS70 2022) (GCA_026018925.1_mTupTan1 2022-11-07) + longLabel large tree shrew (BS70 2022) (% 46.77 coverage) (GCA_026018925.1_mTupTan1 2022-11-07) type bigChain GCA_026018925.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_026018925.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_026018925.1Link.bb track chainLiftOverGCA_041735815.1 parent vgpLiftOver - subGroups query=s033 priority 53.737 shortLabel Inner Mongolia cashmere goat - longLabel LiftOver chain Inner Mongolia cashmere goat (2024) (GCA_041735815.1_T2T-goat2.0 2024-09-04) + longLabel Inner Mongolia cashmere goat (2024) (% 46.26 coverage) (GCA_041735815.1_T2T-goat2.0 2024-09-04) type bigChain GCA_041735815.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_041735815.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_041735815.1Link.bb track chainLiftOverGCA_030848825.1 parent vgpLiftOver - subGroups query=s034 priority 53.98 shortLabel Brazilian free-tailed bat - longLabel LiftOver chain Brazilian free-tailed bat (primary hap 2023) (GCA_030848825.1_DD_mTadBra1_pri 2023-08-22) + longLabel Brazilian free-tailed bat (primary hap 2023) (% 46.02 coverage) (GCA_030848825.1_DD_mTadBra1_pri 2023-08-22) type bigChain GCA_030848825.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_030848825.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_030848825.1Link.bb track chainLiftOverGCA_037157525.1 parent vgpLiftOver - subGroups query=s035 priority 55.144 shortLabel Alvarez's mastiff bat - longLabel LiftOver chain Alvarez's mastiff bat (hap1 2024) (GCA_037157525.1_mMolAlv2.hap1 2024-03-15) + longLabel Alvarez's mastiff bat (hap1 2024) (% 44.86 coverage) (GCA_037157525.1_mMolAlv2.hap1 2024-03-15) type bigChain GCA_037157525.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_037157525.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_037157525.1Link.bb track chainLiftOverGCA_039880945.1 parent vgpLiftOver - subGroups query=s036 priority 55.485 shortLabel northern black mastiff bat - longLabel LiftOver chain northern black mastiff bat (mMolNig1hap1 2024) (GCA_039880945.1_mMolNig1.hap1 2024-05-29) + longLabel northern black mastiff bat (mMolNig1hap1 2024) (% 44.52 coverage) (GCA_039880945.1_mMolNig1.hap1 2024-05-29) type bigChain GCA_039880945.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_039880945.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_039880945.1Link.bb track chainLiftOverGCA_043748645.1 parent vgpLiftOver - subGroups query=s037 priority 55.535 shortLabel Angolan free-tailed bat - longLabel LiftOver chain Angolan free-tailed bat (Cote d'Ivoire 20210831_DDa 2024) (GCA_043748645.1_ASM4374864v1 2024-10-24) + longLabel Angolan free-tailed bat (Cote d'Ivoire 20210831_DDa 2024) (% 44.47 coverage) (GCA_043748645.1_ASM4374864v1 2024-10-24) type bigChain GCA_043748645.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_043748645.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_043748645.1Link.bb track chainLiftOverGCA_039655065.1 parent vgpLiftOver - subGroups query=s038 priority 55.902 shortLabel Merriam's long-tongued bat - longLabel LiftOver chain Merriam's long-tongued bat (hap1 2024) (GCA_039655065.1_mGloMut1.hap1 2024-05-17) + longLabel Merriam's long-tongued bat (hap1 2024) (% 44.10 coverage) (GCA_039655065.1_mGloMut1.hap1 2024-05-17) type bigChain GCA_039655065.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_039655065.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_039655065.1Link.bb track chainLiftOverGCA_043880595.1 parent vgpLiftOver - subGroups query=s039 priority 56.164 shortLabel lesser false vampire bat - longLabel LiftOver chain lesser false vampire bat (Vietnam 20211001_DDb primary hap 2024) (GCA_043880595.1_ASM4388059v1 2024-10-28) + longLabel lesser false vampire bat (Vietnam 20211001_DDb primary hap 2024) (% 43.84 coverage) (GCA_043880595.1_ASM4388059v1 2024-10-28) type bigChain GCA_043880595.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_043880595.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_043880595.1Link.bb track chainLiftOverGCA_038363095.2 parent vgpLiftOver - subGroups query=s040 priority 56.295 shortLabel great fruit-eating bat - longLabel LiftOver chain great fruit-eating bat (v2 hap1 2024) (GCA_038363095.2_mArtLit.hap1 2024-05-21) + longLabel great fruit-eating bat (v2 hap1 2024) (% 43.70 coverage) (GCA_038363095.2_mArtLit.hap1 2024-05-21) type bigChain GCA_038363095.2 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_038363095.2.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_038363095.2Link.bb track chainLiftOverGCA_038363145.1 parent vgpLiftOver - subGroups query=s041 priority 56.392 shortLabel great fruit-eating bat - longLabel LiftOver chain great fruit-eating bat (hap1 2024) (GCA_038363145.1_mArtInt1.hap1 2024-04-22) + longLabel great fruit-eating bat (hap1 2024) (% 43.61 coverage) (GCA_038363145.1_mArtInt1.hap1 2024-04-22) type bigChain GCA_038363145.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_038363145.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_038363145.1Link.bb track chainLiftOverGCA_963383645.1 parent vgpLiftOver - subGroups query=s042 priority 56.621 shortLabel hazel dormouse - longLabel LiftOver chain hazel dormouse (primary hap 2023) (GCA_963383645.1_mMusAve1.1 2023-08-26) + longLabel hazel dormouse (primary hap 2023) (% 43.38 coverage) (GCA_963383645.1_mMusAve1.1 2023-08-26) type bigChain GCA_963383645.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_963383645.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_963383645.1Link.bb track chainLiftOverGCA_037038545.1 parent vgpLiftOver - subGroups query=s043 priority 56.858 shortLabel proboscis bat - longLabel LiftOver chain proboscis bat (hap1 2024) (GCA_037038545.1_mRhyNas2.hap1 2024-03-06) + longLabel proboscis bat (hap1 2024) (% 43.14 coverage) (GCA_037038545.1_mRhyNas2.hap1 2024-03-06) type bigChain GCA_037038545.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_037038545.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_037038545.1Link.bb track chainLiftOverGCA_048771875.1 parent vgpLiftOver - subGroups query=s044 priority 58.449 shortLabel northern gundi - longLabel LiftOver chain northern gundi (hap1 2025) (GCA_048771875.1_mCteGun2.hap1 2025-03-21) + longLabel northern gundi (hap1 2025) (% 41.55 coverage) (GCA_048771875.1_mCteGun2.hap1 2025-03-21) type bigChain GCA_048771875.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_048771875.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_048771875.1Link.bb track chainLiftOverGCA_028571685.1 parent vgpLiftOver - subGroups query=s045 priority 59.163 shortLabel yellow-spotted hyrax - longLabel LiftOver chain yellow-spotted hyrax (mHetBru1 2023) (GCA_028571685.1_mHetBru1.pri 2023-02-10) + longLabel yellow-spotted hyrax (mHetBru1 2023) (% 40.84 coverage) (GCA_028571685.1_mHetBru1.pri 2023-02-10) type bigChain GCA_028571685.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_028571685.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_028571685.1Link.bb track chainLiftOverGCA_964194135.1 parent vgpLiftOver - subGroups query=s046 priority 59.77 shortLabel European mole - longLabel LiftOver chain European mole (hap1 2024) (GCA_964194135.1_mTalEur1.hap1.1 2024-06-28) + longLabel European mole (hap1 2024) (% 40.23 coverage) (GCA_964194135.1_mTalEur1.hap1.1 2024-06-28) type bigChain GCA_964194135.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964194135.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964194135.1Link.bb track chainLiftOverGCA_964094495.2 parent vgpLiftOver - subGroups query=s047 priority 59.953 shortLabel whiskered bat - longLabel LiftOver chain whiskered bat (hap1 2024) (GCA_964094495.2_mMyoMys1.hap1.1 2024-06-12) + longLabel whiskered bat (hap1 2024) (% 40.05 coverage) (GCA_964094495.2_mMyoMys1.hap1.1 2024-06-12) type bigChain GCA_964094495.2 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964094495.2.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964094495.2Link.bb track chainLiftOverGCA_951640355.1 parent vgpLiftOver - subGroups query=s048 priority 59.963 shortLabel northern bat - longLabel LiftOver chain northern bat (primary hap 2023) (GCA_951640355.1_mEptNil1.1 2023-05-18) + longLabel northern bat (primary hap 2023) (% 40.04 coverage) (GCA_951640355.1_mEptNil1.1 2023-05-18) type bigChain GCA_951640355.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_951640355.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_951640355.1Link.bb track chainLiftOverGCA_963455305.1 parent vgpLiftOver - subGroups query=s049 priority 59.969 shortLabel brown big-eared bat - longLabel LiftOver chain brown big-eared bat (primary hap 2023) (GCA_963455305.1_mPleAur1.1 2023-09-20) + longLabel brown big-eared bat (primary hap 2023) (% 40.03 coverage) (GCA_963455305.1_mPleAur1.1 2023-09-20) type bigChain GCA_963455305.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_963455305.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_963455305.1Link.bb track chainLiftOverGCA_026230055.1 parent vgpLiftOver - subGroups query=s050 priority 60.083 shortLabel Townsend's big-eared bat - longLabel LiftOver chain Townsend's big-eared bat (haplotype 1 of 2 COTO_CA2020_CCGP 2022) (GCA_026230055.1_mCorTow1.0.hap1 2022-11-18) + longLabel Townsend's big-eared bat (haplotype 1 of 2 COTO_CA2020_CCGP 2022) (% 39.92 coverage) (GCA_026230055.1_mCorTow1.0.hap1 2022-11-18) type bigChain GCA_026230055.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_026230055.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_026230055.1Link.bb track chainLiftOverGCA_965115925.1 parent vgpLiftOver - subGroups query=s051 priority 60.182 shortLabel Geoffroy's bat - longLabel LiftOver chain Geoffroy's bat (hap1.1 2025) (GCA_965115925.1_mMyoEma1.hap1.1 2025-01-24) + longLabel Geoffroy's bat (hap1.1 2025) (% 39.82 coverage) (GCA_965115925.1_mMyoEma1.hap1.1 2025-01-24) type bigChain GCA_965115925.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_965115925.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_965115925.1Link.bb track chainLiftOverGCA_964212035.2 parent vgpLiftOver - subGroups query=s052 priority 60.252 shortLabel Natterer's bat - longLabel LiftOver chain Natterer's bat (hap1.2 2025) (GCA_964212035.2_mMyoNat1.hap1.2 2025-03-28) + longLabel Natterer's bat (hap1.2 2025) (% 39.75 coverage) (GCA_964212035.2_mMyoNat1.hap1.2 2025-03-28) type bigChain GCA_964212035.2 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964212035.2.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964212035.2Link.bb track chainLiftOverGCA_027563665.1 parent vgpLiftOver - subGroups query=s053 priority 62.46 shortLabel pallid bat - longLabel LiftOver chain pallid bat (TK200870 primary hap 2023) (GCA_027563665.1_DD_ASM_mAP_20210503 2023-01-09) + longLabel pallid bat (TK200870 primary hap 2023) (% 37.54 coverage) (GCA_027563665.1_DD_ASM_mAP_20210503 2023-01-09) type bigChain GCA_027563665.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_027563665.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_027563665.1Link.bb track chainLiftOverGCA_026229955.1 parent vgpLiftOver - subGroups query=s054 priority 63.652 shortLabel North American deer mouse - longLabel LiftOver chain North American deer mouse (MVZ:Mamm:240117 primary hap 2022) (GCA_026229955.1_mPerMan1.0.p 2022-11-14) + longLabel North American deer mouse (MVZ:Mamm:240117 primary hap 2022) (% 36.35 coverage) (GCA_026229955.1_mPerMan1.0.p 2022-11-14) type bigChain GCA_026229955.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_026229955.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_026229955.1Link.bb track chainLiftOverGCA_949987585.1 parent vgpLiftOver - subGroups query=s055 priority 63.748 shortLabel soprano pipistrelle - longLabel LiftOver chain soprano pipistrelle (primary hap 2023) (GCA_949987585.1_mPipPyg2.1 2023-05-01) + longLabel soprano pipistrelle (primary hap 2023) (% 36.25 coverage) (GCA_949987585.1_mPipPyg2.1 2023-05-01) type bigChain GCA_949987585.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_949987585.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_949987585.1Link.bb track chainLiftOverGCA_964339955.1 parent vgpLiftOver - subGroups query=s056 priority 63.876 shortLabel Hanaki's dwarf bat - longLabel LiftOver chain Hanaki's dwarf bat (2024) (GCA_964339955.1_mPipHan1.1 2024-11-14) + longLabel Hanaki's dwarf bat (2024) (% 36.12 coverage) (GCA_964339955.1_mPipHan1.1 2024-11-14) type bigChain GCA_964339955.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964339955.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964339955.1Link.bb track chainLiftOverGCA_963924515.1 parent vgpLiftOver - subGroups query=s057 priority 63.947 shortLabel particolored bat - longLabel LiftOver chain particolored bat (primary hap 2024) (GCA_963924515.1_mVesMur1.1 2024-01-29) + longLabel particolored bat (primary hap 2024) (% 36.05 coverage) (GCA_963924515.1_mVesMur1.1 2024-01-29) type bigChain GCA_963924515.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_963924515.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_963924515.1Link.bb track chainLiftOverGCA_903992545.1 parent vgpLiftOver - subGroups query=s058 priority 64.324 shortLabel common pipistrelle - longLabel LiftOver chain common pipistrelle (2020) (GCA_903992545.1_mPipPip1.1 2020-08-06) + longLabel common pipistrelle (2020) (% 35.68 coverage) (GCA_903992545.1_mPipPip1.1 2020-08-06) type bigChain GCA_903992545.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_903992545.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_903992545.1Link.bb track chainLiftOverGCA_011762505.3 parent vgpLiftOver - subGroups query=s059 priority 66.554 shortLabel African grass rat - longLabel LiftOver chain African grass rat (v3 paternal hap 2024) (GCA_011762505.3_mArvNil1.pat.X 2024-10-22) + longLabel African grass rat (v3 paternal hap 2024) (% 33.45 coverage) (GCA_011762505.3_mArvNil1.pat.X 2024-10-22) type bigChain GCA_011762505.3 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_011762505.3.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_011762505.3Link.bb track chainLiftOverGCA_964271855.1 parent vgpLiftOver - subGroups query=s060 priority 66.675 shortLabel Crete spiny mouse - longLabel LiftOver chain Crete spiny mouse (2024) (GCA_964271855.1_mAcoMin1 2024-10-03) + longLabel Crete spiny mouse (2024) (% 33.33 coverage) (GCA_964271855.1_mAcoMin1 2024-10-03) type bigChain GCA_964271855.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964271855.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_964271855.1Link.bb track chainLiftOverGCA_037038515.1 parent vgpLiftOver - subGroups query=s061 priority 67.03 shortLabel meadow vole - longLabel LiftOver chain meadow vole (hap1 2024) (GCA_037038515.1_mMicPen1.hap1 2024-03-06) + longLabel meadow vole (hap1 2024) (% 32.97 coverage) (GCA_037038515.1_mMicPen1.hap1 2024-03-06) type bigChain GCA_037038515.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_037038515.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_037038515.1Link.bb track chainLiftOverGCA_963924665.1 parent vgpLiftOver - subGroups query=s062 priority 70.19 shortLabel European harvest mouse - longLabel LiftOver chain European harvest mouse (primary hap 2024) (GCA_963924665.1_mMicMin1.1 2024-01-29) + longLabel European harvest mouse (primary hap 2024) (% 29.81 coverage) (GCA_963924665.1_mMicMin1.1 2024-01-29) type bigChain GCA_963924665.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_963924665.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_963924665.1Link.bb track chainLiftOverGCA_031878675.1 parent vgpLiftOver - subGroups query=s063 priority 70.268 shortLabel Botta's pocket gopher - longLabel LiftOver chain Botta's pocket gopher (hap1 2023) (GCA_031878675.1_mThoBot2.hap1 2023-09-25) + longLabel Botta's pocket gopher (hap1 2023) (% 29.73 coverage) (GCA_031878675.1_mThoBot2.hap1 2023-09-25) type bigChain GCA_031878675.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_031878675.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_031878675.1Link.bb track chainLiftOverGCA_043290085.1 parent vgpLiftOver - subGroups query=s064 priority 70.925 shortLabel black and rufous elephant shrew - longLabel LiftOver chain black and rufous elephant shrew (mRhyPet1hap1 2024) (GCA_043290085.1_mRhyPet1.hap1 2024-10-17) + longLabel black and rufous elephant shrew (mRhyPet1hap1 2024) (% 29.08 coverage) (GCA_043290085.1_mRhyPet1.hap1 2024-10-17) type bigChain GCA_043290085.1 bigDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_043290085.1.bb linkDataUrl /gbdb/hg38/bbi/liftOver/hg38.chainLiftOverGCA_043290085.1Link.bb