6b57700763a45c9826c241399e125d1b4c25b8cb hiram Sun Dec 7 22:08:27 2025 -0800 everything for toga2 shoiuld be in /TOGAv2/ directory under gbdb refs #35776 diff --git src/hg/makeDb/trackDb/toga2.ra src/hg/makeDb/trackDb/toga2.ra index f4cd05eb4a9..b0173d30cfb 100644 --- src/hg/makeDb/trackDb/toga2.ra +++ src/hg/makeDb/trackDb/toga2.ra @@ -5,86 +5,86 @@ visibility hide type bigBed 12 + superTrack on html TOGAv2 #################### 4 mammals track HLTOGAannotvsHg38v2 parent TOGAv2 shortLabel TOGA2 human annotations longLabel TOGA 2.0 annotations using human hg38 as reference group genes priority 3 visibility pack itemRgb on type bigBed 12 + - bigDataUrl /gbdb/$D/TOGAvHg38v2/HLTOGAannotVsHg38v2.bb + bigDataUrl /gbdb/$D/TOGAv2/TOGAvHg38v2/HLTOGAannotVsHg38v2.bb labelFields name searchIndex name - searchTrix /gbdb/$D/TOGAvHg38v2/HLTOGAannotVsHg38v2.ix - decorator.default.bigDataUrl /gbdb/$D/TOGAvHg38v2/HLTOGAannotVsHg38v2.decorator.bb + searchTrix /gbdb/$D/TOGAv2/TOGAvHg38v2/HLTOGAannotVsHg38v2.ix + decorator.default.bigDataUrl /gbdb/$D/TOGAv2/TOGAvHg38v2/HLTOGAannotVsHg38v2.decorator.bb decorator.default.maxLabelBases 5000 html TOGAv2 track HLTOGAannotvsMm10v2 parent TOGAv2 shortLabel TOGA2 mouse annotations longLabel TOGA 2.0 annotations using mouse mm10 as reference group genes priority 4 visibility pack itemRgb on type bigBed 12 + - bigDataUrl /gbdb/$D/TOGAvMm10v2/HLTOGAannotVsMm10v2.bb + bigDataUrl /gbdb/$D/TOGAv2/TOGAvMm10v2/HLTOGAannotVsMm10v2.bb labelFields name searchIndex name - searchTrix /gbdb/$D/TOGAvMm10v2/HLTOGAannotVsMm10v2.ix - decorator.default.bigDataUrl /gbdb/$D/TOGAvMm10v2/HLTOGAannotVsMm10v2.decorator.bb + searchTrix /gbdb/$D/TOGAv2/TOGAvMm10v2/HLTOGAannotVsMm10v2.ix + decorator.default.bigDataUrl /gbdb/$D/TOGAv2/TOGAvMm10v2/HLTOGAannotVsMm10v2.decorator.bb decorator.default.maxLabelBases 5000 html TOGAv2 track HLTOGAannotvsHLbosTau10v2 parent TOGAv2 shortLabel TOGA2 cow annotations longLabel TOGA 2.0 annotations using cow bosTau10 as reference group genes priority 4 visibility pack itemRgb on type bigBed 12 + - bigDataUrl /gbdb/$D/TOGAvBosTau10v2/HLTOGAannotVsHLbosTau10v2.bb + bigDataUrl /gbdb/$D/TOGAv2/TOGAvBosTau10v2/HLTOGAannotVsHLbosTau10v2.bb labelFields name searchIndex name - searchTrix /gbdb/$D/TOGAvBosTau10v2/HLTOGAannotVsHLbosTau10v2.ix - decorator.default.bigDataUrl /gbdb/$D/TOGAvBosTau10v2/HLTOGAannotVsHLbosTau10v2.decorator.bb + searchTrix /gbdb/$D/TOGAv2/TOGAvBosTau10v2/HLTOGAannotVsHLbosTau10v2.ix + decorator.default.bigDataUrl /gbdb/$D/TOGAv2/TOGAvBosTau10v2/HLTOGAannotVsHLbosTau10v2.decorator.bb decorator.default.maxLabelBases 5000 html TOGAv2 track HLTOGAannotvsHLeleMaxInd3Av2 parent TOGAv2 shortLabel TOGA2 elephant annotations longLabel TOGA 2.0 annotations using elephant GCF_024166365.1_mEleMax1 as reference group genes priority 5 visibility pack itemRgb on type bigBed 12 + - bigDataUrl /gbdb/$D/TOGAvGCF_024166365.1v2/HLTOGAannotVsHLeleMaxInd3Av2.bb + bigDataUrl /gbdb/$D/TOGAv2/TOGAvGCF_024166365.1v2/HLTOGAannotVsHLeleMaxInd3Av2.bb labelFields name searchIndex name - searchTrix /gbdb/$D/TOGAvGCF_024166365.1v2/HLTOGAannotVsHLeleMaxInd3Av2.ix - decorator.default.bigDataUrl /gbdb/$D/TOGAvGCF_024166365.1v2/HLTOGAannotVsHLeleMaxInd3Av2.decorator.bb + searchTrix /gbdb/$D/TOGAv2/TOGAvGCF_024166365.1v2/HLTOGAannotVsHLeleMaxInd3Av2.ix + decorator.default.bigDataUrl /gbdb/$D/TOGAv2/TOGAvGCF_024166365.1v2/HLTOGAannotVsHLeleMaxInd3Av2.decorator.bb decorator.default.maxLabelBases 5000 html TOGAv2 #################### 5 birds track HLTOGAannotvsHLgalGal7v2 parent TOGAv2 shortLabel TOGA2 chicken annotations longLabel TOGA 2.0 annotations using chicken galGal7 as reference group genes priority 2 visibility pack itemRgb on type bigBed 12 + bigDataUrl /gbdb/$D/TOGAv2/TOGAvGalGal7/HLTOGAannotVsHLgalGal7v2.bb labelFields name