fa9b7f8c38f8fcb9972330f886d0655b44dc0404 hiram Wed Aug 19 23:30:22 2026 -0700 need to get the message about about the disable refs #38082 diff --git src/hg/utils/otto/genArk/asmAlias/runUpdate.sh src/hg/utils/otto/genArk/asmAlias/runUpdate.sh index f99ba8efe81..dfa572cc30a 100755 --- src/hg/utils/otto/genArk/asmAlias/runUpdate.sh +++ src/hg/utils/otto/genArk/asmAlias/runUpdate.sh @@ -7,30 +7,35 @@ cd "${TOP}" eval "$(date "+YMD=%F Y=%Y M=%m DS=%F_%T")" export YMD Y M DS export db="hgcentraltest" export logDir="${TOP}/log/${Y}/${M}" mkdir -p "${logDir}" export logFile="${logDir}/${DS}.txt" export prevAliasTsv="${logDir}/${YMD}.asmAlias.tsv.gz" export updateTsv="${logDir}/update.${YMD}.tsv" printf "### logFile: log/${Y}/${M}/${DS}.txt.gz\n" >> "${logFile}" printf "asmAlias update disabled until code fix in place\n" >> "${logFile}" +gzip -f "${logFile}" +printf "##############################################\n" 1>&2 +printf "### asmAlias update change log ${DS}\n" 1>&2 +zcat "${logFile}.gz" 1>&2 +printf "##############################################\n" 1>&2 exit 0 # do not overwrite this copy if it was already done today if [ ! -s "${prevAliasTsv}" ]; then hgsql -N -e 'select * from asmAlias;' "${db}" \ | gzip -c > "${prevAliasTsv}" fi printf "### cwd: %s\n" "$(pwd -P)" >> "${logFile}" printf "### logFile: log/${Y}/${M}/${DS}.txt.gz\n" >> "${logFile}" printf "####### running the update command:\n" >> "${logFile}" printf "time (./asmAliasUpdate.py -o update.${YMD}.tsv > update.${DS}.out 2> update.${DS}.err) >> logFile\n" >> "${logFile}" time (./asmAliasUpdate.py -o "${updateTsv}" > ${logDir}/update.${DS}.out 2> ${logDir}/update.${DS}.err) >> "${logFile}" 2>&1