3f93380b226036b64a4f43c0cae6701109e04c1d
hiram
  Thu Oct 23 11:56:14 2025 -0700
sorting the file listings so everything is the same everywhere and making up the push list for admin rsync cron scripts

diff --git src/hg/utils/otto/genArk/gbDbGenArkList.sh src/hg/utils/otto/genArk/gbDbGenArkList.sh
index e873cae4f77..b1be47b01e0 100755
--- src/hg/utils/otto/genArk/gbDbGenArkList.sh
+++ src/hg/utils/otto/genArk/gbDbGenArkList.sh
@@ -8,40 +8,40 @@
 export statList="gbdbGenArkStat.${machName}.${DS}"
 export fileList="gbdbGenark.fl"
 export quickLiftFileList="gbdbQuickLift.fl"
 export quickLiftStat="gbdbQuickLiftStat.${machName}.${DS}"
 
 find -L /gbdb/genark/GCA /gbdb/genark/GCF -type d | sort \
   | gzip -c > /dev/shm/${directoryList}.gz
 
 ssh otto@hgwdev "mkdir -p /hive/data/inside/GenArk/pushRR/logs/${Y}/${M}"
 scp -p /dev/shm/${directoryList}.gz \
   otto@hgwdev:/hive/data/inside/GenArk/pushRR/logs/${Y}/${M}/ > /dev/null
 
 rm -f /dev/shm/${directoryList}.gz
 
 cd /gbdb/genark
-find . -type f | sed -e 's#^./##;' | gzip -c > /dev/shm/${fileList}.gz
+find . -type f | sed -e 's#^./##;' | sort | gzip -c > /dev/shm/${fileList}.gz
 zcat /dev/shm/${fileList}.gz | xargs stat --printf="%Y\t%n\n" | gzip -c > /dev/shm/${statList}.gz
 scp -p /dev/shm/${statList}.gz \
   otto@hgwdev:/hive/data/inside/GenArk/pushRR/logs/${Y}/${M}/ > /dev/null
 
 cd /gbdb
 ls -d */quickLift | while read Q
 do
   find -L ./${Q} -type f
-done | sed -e 's#^./##;' | gzip -c > /dev/shm/${quickLiftFileList}.gz
+done | sed -e 's#^./##;' | sort | gzip -c > /dev/shm/${quickLiftFileList}.gz
 
 zcat /dev/shm/${quickLiftFileList}.gz | xargs stat -L --printf="%Y\t%n\n" \
   | gzip -c > /dev/shm/${quickLiftStat}.gz
 
 scp -p /dev/shm/${quickLiftStat}.gz \
   otto@hgwdev:/hive/data/inside/GenArk/pushRR/logs/${Y}/${M}/ > /dev/null
 
 if [[ "${machName}" =~ ^(hgw1|hgwbeta)$ ]]; then
   scp -p /dev/shm/${statList}.gz \
     otto@hgwdev:/hive/data/inside/GenArk/pushRR/${machName}.todayList.gz > /dev/null
   scp -p /dev/shm/${quickLiftStat}.gz \
     otto@hgwdev:/hive/data/inside/GenArk/pushRR/${machName}.today.quickLiftList.gz > /dev/null
 fi
 
 rm -f /dev/shm/${fileList}.gz /dev/shm/${statList}.gz \