a419c78d2f26b51f510fcce2f973c94c0c4beb99 hiram Fri Dec 5 11:09:55 2025 -0800 TOGA V2 shortLabel refs #35576 diff --git src/hg/makeDb/trackDb/toga2.ra src/hg/makeDb/trackDb/toga2.ra index e7fe0b80a8c..f4cd05eb4a9 100644 --- src/hg/makeDb/trackDb/toga2.ra +++ src/hg/makeDb/trackDb/toga2.ra @@ -1,163 +1,163 @@ track TOGAv2 -shortLabel TOGAv2 +shortLabel TOGA V2 longLabel TOGA 2.0 annotations, multiple reference group genes visibility hide type bigBed 12 + superTrack on html TOGAv2 #################### 4 mammals track HLTOGAannotvsHg38v2 parent TOGAv2 shortLabel TOGA2 human annotations longLabel TOGA 2.0 annotations using human hg38 as reference group genes priority 3 visibility pack itemRgb on type bigBed 12 + bigDataUrl /gbdb/$D/TOGAvHg38v2/HLTOGAannotVsHg38v2.bb labelFields name searchIndex name searchTrix /gbdb/$D/TOGAvHg38v2/HLTOGAannotVsHg38v2.ix decorator.default.bigDataUrl /gbdb/$D/TOGAvHg38v2/HLTOGAannotVsHg38v2.decorator.bb decorator.default.maxLabelBases 5000 html TOGAv2 track HLTOGAannotvsMm10v2 parent TOGAv2 shortLabel TOGA2 mouse annotations longLabel TOGA 2.0 annotations using mouse mm10 as reference group genes priority 4 visibility pack itemRgb on type bigBed 12 + bigDataUrl /gbdb/$D/TOGAvMm10v2/HLTOGAannotVsMm10v2.bb labelFields name searchIndex name searchTrix /gbdb/$D/TOGAvMm10v2/HLTOGAannotVsMm10v2.ix decorator.default.bigDataUrl /gbdb/$D/TOGAvMm10v2/HLTOGAannotVsMm10v2.decorator.bb decorator.default.maxLabelBases 5000 html TOGAv2 track HLTOGAannotvsHLbosTau10v2 parent TOGAv2 shortLabel TOGA2 cow annotations longLabel TOGA 2.0 annotations using cow bosTau10 as reference group genes priority 4 visibility pack itemRgb on type bigBed 12 + bigDataUrl /gbdb/$D/TOGAvBosTau10v2/HLTOGAannotVsHLbosTau10v2.bb labelFields name searchIndex name searchTrix /gbdb/$D/TOGAvBosTau10v2/HLTOGAannotVsHLbosTau10v2.ix decorator.default.bigDataUrl /gbdb/$D/TOGAvBosTau10v2/HLTOGAannotVsHLbosTau10v2.decorator.bb decorator.default.maxLabelBases 5000 html TOGAv2 track HLTOGAannotvsHLeleMaxInd3Av2 parent TOGAv2 shortLabel TOGA2 elephant annotations longLabel TOGA 2.0 annotations using elephant GCF_024166365.1_mEleMax1 as reference group genes priority 5 visibility pack itemRgb on type bigBed 12 + bigDataUrl /gbdb/$D/TOGAvGCF_024166365.1v2/HLTOGAannotVsHLeleMaxInd3Av2.bb labelFields name searchIndex name searchTrix /gbdb/$D/TOGAvGCF_024166365.1v2/HLTOGAannotVsHLeleMaxInd3Av2.ix decorator.default.bigDataUrl /gbdb/$D/TOGAvGCF_024166365.1v2/HLTOGAannotVsHLeleMaxInd3Av2.decorator.bb decorator.default.maxLabelBases 5000 html TOGAv2 #################### 5 birds track HLTOGAannotvsHLgalGal7v2 parent TOGAv2 shortLabel TOGA2 chicken annotations longLabel TOGA 2.0 annotations using chicken galGal7 as reference group genes priority 2 visibility pack itemRgb on type bigBed 12 + bigDataUrl /gbdb/$D/TOGAv2/TOGAvGalGal7/HLTOGAannotVsHLgalGal7v2.bb labelFields name searchIndex name searchTrix /gbdb/$D/TOGAv2/TOGAvGalGal7/HLTOGAannotVsHLgalGal7v2.ix decorator.default.bigDataUrl /gbdb/$D/TOGAv2/TOGAvGalGal7/HLTOGAannotVsHLgalGal7v2.decorator.bb decorator.default.maxLabelBases 5000 html TOGAv2 track HLTOGAannotvsHLtaeGut5v2 parent TOGAv2 shortLabel TOGA2 zebrafinch annotations longLabel TOGA 2.0 annotations using zebrafinch taeGut5 as reference group genes priority 3 visibility pack itemRgb on type bigBed 12 + bigDataUrl /gbdb/$D/TOGAv2/TOGAvGCF_003957565.2v2/HLTOGAannotVsHLtaeGut5v2.bb labelFields name searchIndex name searchTrix /gbdb/$D/TOGAv2/TOGAvGCF_003957565.2v2/HLTOGAannotVsHLtaeGut5v2.ix decorator.default.bigDataUrl /gbdb/$D/TOGAv2/TOGAvGCF_003957565.2v2/HLTOGAannotVsHLtaeGut5v2.decorator.bb decorator.default.maxLabelBases 5000 html TOGAv2 track HLTOGAannotvsHLrisTri2v2 parent TOGAv2 shortLabel TOGA2 kittiwake annotations longLabel TOGA 2.0 annotations using Black-legged kittiwake HLrisTri2 as reference group genes priority 4 visibility pack itemRgb on type bigBed 12 + bigDataUrl /gbdb/$D/TOGAv2/TOGAvGCF_028500815.1v2/HLTOGAannotVsHLrisTri2v2.bb labelFields name searchIndex name searchTrix /gbdb/$D/TOGAv2/TOGAvGCF_028500815.1v2/HLTOGAannotVsHLrisTri2v2.ix decorator.default.bigDataUrl /gbdb/$D/TOGAv2/TOGAvGCF_028500815.1v2/HLTOGAannotVsHLrisTri2v2.decorator.bb decorator.default.maxLabelBases 5000 html TOGAv2 track HLTOGAannotvsHLcorHaw3v2 parent TOGAv2 shortLabel TOGA2 crow annotations longLabel TOGA 2.0 annotations using Hawaiian crow HLcorHaw3 as reference group genes priority 5 visibility pack itemRgb on type bigBed 12 + bigDataUrl /gbdb/$D/TOGAv2/TOGAvGCF_020740725.1v2/HLTOGAannotVsHLcorHaw3v2.bb labelFields name searchIndex name searchTrix /gbdb/$D/TOGAv2/TOGAvGCF_020740725.1v2/HLTOGAannotVsHLcorHaw3v2.ix decorator.default.bigDataUrl /gbdb/$D/TOGAv2/TOGAvGCF_020740725.1v2/HLTOGAannotVsHLcorHaw3v2.decorator.bb decorator.default.maxLabelBases 5000 html TOGAv2 track HLTOGAannotvsHLdroNov3v2 parent TOGAv2 shortLabel TOGA2 emu annotations longLabel TOGA 2.0 annotations using emu HLdroNov3 as reference group genes priority 6 visibility pack itemRgb on type bigBed 12 + bigDataUrl /gbdb/$D/TOGAv2/TOGAvGCF_036370855.1v2/HLTOGAannotVsHLdroNov3v2.bb labelFields name searchIndex name searchTrix /gbdb/$D/TOGAv2/TOGAvGCF_036370855.1v2/HLTOGAannotVsHLdroNov3v2.ix decorator.default.bigDataUrl /gbdb/$D/TOGAv2/TOGAvGCF_036370855.1v2/HLTOGAannotVsHLdroNov3v2.decorator.bb decorator.default.maxLabelBases 5000 html TOGAv2