17859fc49832ff3dc8144ea2ca5f59250050fb03
hiram
  Tue Oct 21 14:03:04 2025 -0700
indicate where these scripts come from in the source tree refs #35575

diff --git src/hg/utils/otto/genArk/pushRR/pushRR.sh src/hg/utils/otto/genArk/pushRR/pushRR.sh
index d875f43c5de..76e39ffac6b 100755
--- src/hg/utils/otto/genArk/pushRR/pushRR.sh
+++ src/hg/utils/otto/genArk/pushRR/pushRR.sh
@@ -1,35 +1,42 @@
 #!/bin/bash
 
+######################################################################
+###  this script from the source tree in:
+###     src/hg/utils/otto/genArk/pushRR/pushRR.sh
+###  used in an otto cron job:
+###   03 01 * * * /hive/data/inside/GenArk/pushRR/pushRR.sh
+######################################################################
+
 # exit on any error
 set -beEu -o pipefail
 
 export TOP="/hive/data/inside/GenArk/pushRR"
 cd "${TOP}"
 
 export expectHost="hgwdev"
 
 export hostName=$(hostname -s)
 if [[ "${hostName}" != "${expectHost}" ]]; then
   printf "ERROR: must run this on %s !  This is: %s\n" "${expectHost}" "${hostName}" 1>&2
   exit 255
 fi
 
 export DS=`date "+%F"`
 export Y=`date "+%Y"`
 export M=`date "+%m"`
 export logDir="${TOP}/logs/${Y}/${M}"
 
 mkdir -p "${logDir}"
 
 logFile="${logDir}/rsync.${DS}"
 
 for M in hgwbeta hgw0 hgw1 hgw2 "Genome-Browser-Mirror-3.dhcp.uni-bielefeld.de"
 do
   printf "### sending to machine %s\n" "${M}" >> "${logFile}"
   time (rsync --delete --stats -a -L --itemize-changes --exclude="alpha.hub.txt" --exclude="beta.hub.txt" --exclude="public.hub.txt" --exclude="user.hub.txt" --exclude="contrib/" "/gbdb/genark/GCA/" "qateam@${M}:/gbdb/genark/GCA/") >> "${logFile}" 2>&1
   time (rsync --delete --stats -a -L --itemize-changes --exclude="alpha.hub.txt" --exclude="beta.hub.txt" --exclude="public.hub.txt" --exclude="user.hub.txt" --exclude="contrib/" "/gbdb/genark/GCF/" "qateam@${M}:/gbdb/genark/GCF/") >> "${logFile}" 2>&1
 done
 
 printf "### running alphaBetaPush \n" >> "${logFile}"
 time (./alphaBetaPush.pl)  >> "${logFile}" 2>&1
 gzip "${logFile}"