b8657fad9bac3c8148a6c942a60ef8a6f919e0db jcasper Sun Aug 23 01:11:18 2026 -0700 Installing updated hg.conf files from UCSC servers diff --git confs/hgwdev.hg.conf confs/hgwdev.hg.conf index 3df87807fa5..268eebdfcfa 100644 --- confs/hgwdev.hg.conf +++ confs/hgwdev.hg.conf @@ -486,30 +486,35 @@ # refs #37893 (new hgBlat results page): show the invitation banner on the CLASSIC BLAT results # page so users can opt in to the new interactive results table. The new page itself is reached # via that banner or a blatNewPage=1 link and remembered per-user in the cart; this flag only # controls whether the invite banner appears. Off by default while the page is being tested. blatNewPageBanner=on # refs #37893: when hgBlat builds a new BLAT results custom track, decide what happens to the # user's PREVIOUS BLAT results tracks so they don't pile up in the browser. Values: # keep (default) leave earlier BLAT tracks visible # hide set earlier BLAT tracks to hidden so only the newest result shows # delete remove earlier BLAT tracks entirely # Only affects tracks tagged as BLAT results (trackDb setting blatResult=on), and only at track # creation time - never when the user follows the result links. blatOldTracks=hide +# refs #38086: put BLAT result custom tracks in their own "BLAT Results" track group (with a +# "Delete all" button) instead of Custom Tracks, and name headerless queries by size + top-hit +# gene (e.g. "360bp SOD1") instead of "blat YourSeq". Off by default while in QA. +blatResultsGroup=on + # Enables genark hubs to appear in assembly dropdowns for hgConvert/hgLiftOver genarkLiftOver=on # Enables the gear and x icon for hgTracks #greyBarIcons=on # very experimental, only on hgwdev: support for an embedded IGV track, see #36337 showIgv=on # Enables approved hgLogin redirect #login.approvedReturn=https://genome-preview.ucsc.edu/ # Enables single path loading for bigBed. Also, affects bigGenePred and bigPsl. #bigBedOnePath=on @@ -531,26 +536,26 @@ doMyVariants=on # Set a limit on how many IP addresses can use the same hguid before a forced captcha check, see #37494 hguidIpTracking.enabled=on bottleneck.host=hgwdev bottleneck.port=17776 # Ordered comma-separated list of genePred tables tried when resolving "<symbol> exon <N>" searches. # First table with a matching gene symbol wins. Remove or reorder to suit the assembly. geneTracks=ncbiRefSeqSelect,knownGene,ncbiRefSeq,ncbiRefSeqHistorical # Allow changing of item color via right click canColorItems=on -# 2026-07-24 - Hiram - control feature in hgLogin for a password reveal button -# default on, set to 'off' to disable this feature +# Enables the password reveal button in hgLogin, refs #37921 login.pwdEyeIcon=on # Enable passwordless email-link sign-in and the change-email option (genome-test), ticket 37929 login.emailLink=on # Enable new BLAT UI, 37996 blatNewForm=on +# Enables the redesigned hgc alignment viewer, refs #37893 modernAlignPage=on