1ab02127d858c69f300d5be34d2be5a7ef8f1882 jcasper Sun Aug 24 01:11:23 2025 -0700 Installing updated hg.conf files from UCSC servers diff --git confs/rr.hg.conf confs/rr.hg.conf index dc3ed725c2e..27c5e5ca63f 100644 --- confs/rr.hg.conf +++ confs/rr.hg.conf @@ -213,37 +213,40 @@ # Increases the number of items that can be queried from a bigBed file bigBedMaxItems=100000 # Enables the pop-up when clicking items option on the configure page canDoHgcInPopUp=true # Enables the grouping feature for track hubs trackHubsCanAddGroups=on # Adding more aggressive bot delay #35729 newBotDelay=on # Increases the number of items that can be queried from a BAM file BAMMaxItems=30000 -# hubSpace related settings: -# show the hubSpace UI -###storeUserFiles=true -# location of files stored by tusd -###tusdDataDir=/data/tusd/data/ -# The tusd endpoint files are uploaded to -###hubSpaceTusdEndpoint=https://hubspace.soe.ucsc.edu/files -# The web accessible location after tusd moves the files -# when an upload is completed -###hubSpaceUrl=https://hubspace.soe.ucsc.edu/hubspace -# let users create an api key on the hub development tab to use hubSpace from the command line -###showHubApiKey=true -# if tusd is running on a different server and is mounted locally, -# rewrite the tusdDataDir value -# with the tusdMountPoint value to check files exist -###tusdMountPoint=/hubspace/ +## hubSpace related settings: +## show the hubSpace UI +#storeUserFiles=true +## location of files stored by tusd +#tusdDataDir=/data/tusd/data +## The tusd endpoint files are uploaded to +#hubSpaceTusdEndpoint=https://hubspace.soe.ucsc.edu/files +## The web accessible location after tusd moves the files +## when an upload is completed +#hubSpaceUrl=https://hubspace.soe.ucsc.edu/hubspace +## let users create an api key on the hub development tab to use hubSpace from the command line +#showHubApiKey=true +## if tusd is running on a different server and is mounted locally, +## rewrite the tusdDataDir value +## with the tusdMountPoint value to check files exist +#tusdMountPoint=/hubspace/ # BLAT shows locus name of the match #35993 blatShowLocus=off # new flag for testing rm32751 turn on automatic creation of custom tracks from hgBlat results. autoBlatBigPsl=on + +# Enables the gear and x icon for hgTracks +greyBarIcons=off