5428fe6145c9d7971704b42e2945fa34978f59c2 jnavarr5 Fri Oct 24 10:49:47 2025 -0700 Accidentally removed the Decipher tracks from hgwdev, refs #36529 diff --git src/hg/makeDb/trackDb/human/decipher.ra src/hg/makeDb/trackDb/human/decipher.ra index 1f60590ecca..fd13f4841e7 100644 --- src/hg/makeDb/trackDb/human/decipher.ra +++ src/hg/makeDb/trackDb/human/decipher.ra @@ -1,22 +1,21 @@ track decipherContainer superTrack on shortLabel DECIPHER longLabel DECIPHER cartVersion 7 group phenDis -pennantIcon Updated red ../goldenPath/newsarch.html#091925 "Added the DDG2P track Sep. 19, 2025" track decipher priority 1 shortLabel DECIPHER CNVs longLabel DECIPHER CNVs group phenDis visibility pack type bigBed 9 + itemRgb on tableBrowser off knownCanonToDecipher knownToDecipher decipherRaw bigDataUrl /gbdb/$D/decipher/decipherCnv.bb url https://www.deciphergenomics.org/patient/$$ urlLabel Decipher Patient View: filter.size 0 filterByRange.size on @@ -48,39 +47,39 @@ priority 3 parent decipherContainer type bigBed 9 + shortLabel DECIPHER Population CNVs longLabel DECIPHER: Population CNVs bigDataUrl /gbdb/$D/decipher/population_cnv.bb visibility pack mouseOver <b>Position</b>: $chrom:${chromStart}-${chromEnd}<br> <b>Type of CNV</b>: $type<br> <b>Frequency of CNV</b>: $frequency<br> <b>Number of Observations</b>: $observations<br> <b>Sample Size of Study</b>: $sample_size<br> html decipherContainer searchIndex name noScoreFilter on filterValues.type loss,gain,del/dup filter.sample_size 0 track ddg2p + release beta,public parent decipherContainer shortLabel DDG2P longLabel Developmental Disorders Gene2Phenotype (DDG2P) type bigBed 9 + bigDataUrl /gbdb/$D/ddg2p/ddg2p.bb visibility pack mouseOver <b>G2P ID:</b> ${g2p_id} <br> <b>Variant Consequence:</b> ${variant_consequence} <br> <b>Disease Name:</b> ${disease_name} <br> <b>Pubmed IDs:</b> ${publications} <br> <b>Molecular Mechanism:</b> ${molecular_mechanism} <br> <b>Allelic Requirements:</b> ${allelic_requirement} <br> <b>Date of Last Review:</b> ${date_of_last_review} html decipherContainer - pennantIcon New red ../goldenPath/newsarch.html#091925 "Released Sep. 19, 2025" searchTable decipher searchMethod exact searchType bigBed searchTable decipherPopulation searchMethod exact searchType bigBed searchName decipherId searchTable decipher termRegex [0-9]+ searchType bed searchPriority 50